Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region_human/call_motif/Neuroectoderm_and_glia/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
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More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1283
Total background sequences = 90103
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G A C T C A T G A G T C A G T C G T C A G A C T C T A G C T A G G T A C T C G A C T G A A G T C 1e-74-1.709e+027.87%0.62%51.3bp (72.4bp)Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.931)
More Information | Similar Motifs Found		motif file (matrix)
2 G C A T C G T A C G A T A C T G A G T C C G T A C G T A C G T A C G A T A T C G G C T A T A C G 1e-56-1.309e+025.92%0.45%51.4bp (64.6bp)Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer(0.974)
More Information | Similar Motifs Found		motif file (matrix)
3 A T G C A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G T C C G A T A C T G A C T G 1e-53-1.243e+021.79%0.00%49.3bp (42.2bp)Sox21(HMG)/ESC-SOX21-ChIP-Seq(GSE110505)/Homer(0.831)
More Information | Similar Motifs Found		motif file (matrix)
4 T G C A T G C A C G T A C T G A C T A G T C A G T C A G A C T G 1e-36-8.442e+0147.23%30.24%54.5bp (78.1bp)Yy1/MA0095.4/Jaspar(0.712)
More Information | Similar Motifs Found		motif file (matrix)
5 C T A G C A T G T C A G C T A G A T G C C A G T C A G T A C G T A G C T A C G T 1e-30-6.967e+0119.10%8.73%54.3bp (77.6bp)LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer(0.639)
More Information | Similar Motifs Found		motif file (matrix)
6 C T A G C A T G T A C G C T A G C T A G C T G A C T G A C T G A T C G A C G T A 1e-26-6.160e+0126.58%14.88%54.8bp (81.9bp)ZNF75A/MA2097.1/Jaspar(0.668)
More Information | Similar Motifs Found		motif file (matrix)
7 A T C G T G A C T C A G A T G C T G C A G A C T C G A T G C T A 1e-24-5.570e+0145.05%31.34%54.2bp (76.4bp)Dmbx1/MA0883.2/Jaspar(0.687)
More Information | Similar Motifs Found		motif file (matrix)
8 C T A G C T A G C G T A A C T G C T A G C T G A G T C A A C G T C G A T A T G C G T C A C G T A 1e-23-5.495e+011.64%0.05%35.2bp (63.7bp)PB0068.1_Sox1_1/Jaspar(0.640)
More Information | Similar Motifs Found		motif file (matrix)
9 A C T G A C T G G T A C A G T C A C G T C T A G A C G T A C T G C G T A A C G T C T A G C T A G 1e-23-5.408e+011.09%0.01%60.5bp (42.8bp)Lef1/MA0768.3/Jaspar(0.682)
More Information | Similar Motifs Found		motif file (matrix)
10 A C T G C A T G C A T G C A T G C T A G C T A G C T A G C T A G T C A G T C A G 1e-21-4.921e+0126.19%15.68%54.3bp (84.3bp)ZNF740/MA0753.3/Jaspar(0.913)
More Information | Similar Motifs Found		motif file (matrix)
11 A T G C A C G T A G C T A C G T C A T G G T C A C G T A C G A T 1e-18-4.212e+0137.26%25.99%57.0bp (71.4bp)LIN54/MA0619.2/Jaspar(0.771)
More Information | Similar Motifs Found		motif file (matrix)
12 A G T C A C G T A G T C A G T C A C G T A G T C C G T A A C G T A C G T C G T A 1e-17-3.968e+011.17%0.04%29.1bp (96.1bp)POU6F1/MA1549.2/Jaspar(0.825)
More Information | Similar Motifs Found		motif file (matrix)
13 A C G T A C T G A C T G G T C A A C G T C G T A A C T G A C G T A C T G A C G T C G T A A G C T 1e-16-3.908e+010.62%0.00%48.8bp (20.9bp)Foxq1/MA0040.2/Jaspar(0.624)
More Information | Similar Motifs Found		motif file (matrix)
14 T G A C A G C T C A G T C G T A C T G A G A C T T A G C C A T G 1e-16-3.817e+0114.58%7.63%52.6bp (73.8bp)VENTX/MA0724.1/Jaspar(0.813)
More Information | Similar Motifs Found		motif file (matrix)
15 C G A T A T G C A T G C A C T G C T A G G A T C A G C T C G T A G A T C C G A T 1e-16-3.801e+018.81%3.65%51.5bp (77.5bp)PB0077.1_Spdef_1/Jaspar(0.688)
More Information | Similar Motifs Found		motif file (matrix)
16 A G T C G A T C G T A C T C A G A T G C T C G A T G C A G C T A G C T A C G A T 1e-16-3.750e+0111.69%5.61%55.9bp (75.2bp)E2F7/MA0758.1/Jaspar(0.707)
More Information | Similar Motifs Found		motif file (matrix)
17 A C T G A G T C A C G T A C T G A G T C A G T C C G T A C G A T A C T G C G T A C G T A A C T G 1e-14-3.356e+010.62%0.00%41.4bp (43.5bp)Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer(0.636)
More Information | Similar Motifs Found		motif file (matrix)
18 A C G T A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A C T G A C T G A G T C 1e-13-3.209e+010.47%0.00%39.2bp (0.0bp)NR2C1/MA1535.2/Jaspar(0.662)
More Information | Similar Motifs Found		motif file (matrix)
19 C G A T G C A T A G T C T C A G T A G C C T G A T C A G T A G C 1e-13-3.196e+0126.97%18.28%55.0bp (74.8bp)NFIA/MA0670.2/Jaspar(0.733)
More Information | Similar Motifs Found		motif file (matrix)
20 C G T A C T A G T A C G G T C A A C G T A G T C A C T G G A C T G C T A C G T A 1e-13-3.041e+014.13%1.22%59.0bp (74.3bp)HOXA9/MA0594.3/Jaspar(0.731)
More Information | Similar Motifs Found		motif file (matrix)
21 A G T C A C G T C G T A A C T G A C T G A G T C C G T A C G T A A G T C A C T G 1e-12-2.984e+011.09%0.06%38.7bp (48.2bp)RFX7/MA1554.2/Jaspar(0.682)
More Information | Similar Motifs Found		motif file (matrix)
22 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C G T A C G T 1e-12-2.862e+010.55%0.00%48.6bp (19.3bp)Nfat5/MA0606.3/Jaspar(0.676)
More Information | Similar Motifs Found		motif file (matrix)
23 * T G A C C G A T C A T G T A G C A G T C C A G T G T C A C G T A C A G T A G C T C G T A A C T G 1e-11-2.721e+011.40%0.14%37.9bp (51.2bp)LHX6/MA0658.2/Jaspar(0.754)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C G T C G T A A G T C A C G T A C T G C G T A C G T A C G T A C G T A C G T A A C T G C G T A 1e-11-2.604e+010.39%0.00%12.1bp (22.4bp)Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer(0.631)
More Information | Similar Motifs Found		motif file (matrix)
25 * C G T A A C G T A C G T A C G T A T C G A G C T A G T C C G T A A G T C A C T G 1e-11-2.601e+011.17%0.10%51.7bp (53.7bp)PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer(0.756)
More Information | Similar Motifs Found		motif file (matrix)
26 * A C G T A C T G C G T A A G T C C T G A A C G T A C T G A G T C A G T C A G T C 1e-10-2.392e+010.70%0.02%52.3bp (68.8bp)HIC2/MA0738.2/Jaspar(0.726)
More Information | Similar Motifs Found		motif file (matrix)
27 * A G T C A G T C C G T A A C T G C G T A A G T C A G T C A C G T A G T C A C G T A C T G C G T A 1e-10-2.380e+010.47%0.01%20.5bp (58.0bp)Hand1/MA2123.1/Jaspar(0.786)
More Information | Similar Motifs Found		motif file (matrix)
28 * A C G T A G T C A G C T A C G T A C G T A C G T A G T C C G T A A C T G C G T A A G T C A G T C 1e-10-2.380e+010.47%0.00%29.3bp (37.6bp)Hand1/MA2123.1/Jaspar(0.673)
More Information | Similar Motifs Found		motif file (matrix)
29 * T A C G C A T G A G T C A C T G C G T A A C G T C G T A G A C T 1e-8-2.044e+013.98%1.52%45.8bp (78.1bp)YY2/MA0748.3/Jaspar(0.647)
More Information | Similar Motifs Found		motif file (matrix)
30 * T A C G C G A T A T C G C G A T T A C G C A G T A T C G C A G T A C T G G A C T A C T G C A G T 1e-8-2.035e+014.05%1.57%60.1bp (54.9bp)KLF9/MA1107.3/Jaspar(0.726)
More Information | Similar Motifs Found		motif file (matrix)
31 * T A C G T C A G T C A G T G C A C T A G C G T A C T A G C T G A 1e-8-1.986e+0126.27%19.51%56.9bp (76.8bp)ZNF768/MA1731.2/Jaspar(0.718)
More Information | Similar Motifs Found		motif file (matrix)
32 * C T G A C G T A C G T A A G T C A C G T A C G T A G C T A C G T 1e-7-1.704e+017.40%4.09%59.1bp (76.7bp)NR1I3/MA1534.2/Jaspar(0.724)
More Information | Similar Motifs Found		motif file (matrix)
33 * A T G C A C G T C G T A G C T A T C G A A T G C C G A T A T C G 1e-6-1.583e+019.74%6.02%58.5bp (69.0bp)SIX1/MA1118.2/Jaspar(0.679)
More Information | Similar Motifs Found		motif file (matrix)
34 * C G T A G A T C A C G T C G A T G A T C T A C G A T C G G T C A 1e-6-1.488e+012.03%0.63%44.6bp (84.7bp)PB0115.1_Ehf_2/Jaspar(0.694)
More Information | Similar Motifs Found		motif file (matrix)
35 * C G T A A C T G A G T C A G T C A C G T A C T G C G T A C G T A 1e-5-1.243e+012.18%0.81%57.4bp (69.2bp)Zfp335/MA2002.2/Jaspar(0.747)
More Information | Similar Motifs Found		motif file (matrix)
36 * C A G T G A T C C T G A C T G A C A G T G C T A T C A G C A T G 1e-4-1.012e+012.88%1.39%51.9bp (66.0bp)Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer(0.768)
More Information | Similar Motifs Found		motif file (matrix)