Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region_human/call_motif/Mesoderm/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 482
Total background sequences = 89923
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T C A T G C A A G T C T G C A C A G T T G A C A G C T C A T G A T C G C G T A 1e-156-3.606e+0236.31%2.22%50.4bp (71.6bp)ZBTB18/MA0698.2/Jaspar(0.976)
More Information | Similar Motifs Found		motif file (matrix)
2 G A T C C G A T A C T G A C T G C G A T C G A T A G C T A G C T T G C A G T C A A G C T G A C T 1e-40-9.297e+0110.79%0.79%54.4bp (59.2bp)Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer(0.725)
More Information | Similar Motifs Found		motif file (matrix)
3 A C T G A G T C C T A G C G T A A C T G A C G T A C T G A C T G A C T G C G A T A G T C A C G T 1e-22-5.250e+011.66%0.00%65.1bp (0.0bp)PB0114.1_Egr1_2/Jaspar(0.729)
More Information | Similar Motifs Found		motif file (matrix)
4 G T C A A C G T A G T C C G T A A C G T A G T C G C T A C G T A C G T A C G T A A G C T C T A G 1e-20-4.673e+012.07%0.01%51.0bp (34.1bp)PH0017.1_Cux1_2/Jaspar(0.617)
More Information | Similar Motifs Found		motif file (matrix)
5 C T G A A C T G A C T G A C T G G T A C A T G C A C T G G T A C C G A T A C T G C T A G C T A G 1e-19-4.517e+011.45%0.00%45.1bp (0.0bp)NHLH1/MA0048.3/Jaspar(0.617)
More Information | Similar Motifs Found		motif file (matrix)
6 A G T C C G T A C G T A C G T A A C T G C G T A A G T C A C T G C G T A A C G T A C T G A C T G 1e-19-4.517e+011.45%0.00%25.3bp (5.8bp)Sox6/MA0515.1/Jaspar(0.619)
More Information | Similar Motifs Found		motif file (matrix)
7 G T A C G A C T A C G T A C T G C T A G G T C A C G T A C G T A 1e-19-4.385e+0136.31%18.72%55.7bp (70.2bp)Nfatc1/MA0624.3/Jaspar(0.898)
More Information | Similar Motifs Found		motif file (matrix)
8 A C T G A G T C A C G T A C T G A C T G A C T G A G T C A G T C A G T C A C T G A C T G C G T A 1e-18-4.372e+011.66%0.00%63.1bp (42.4bp)ZNF692/MA1986.2/Jaspar(0.758)
More Information | Similar Motifs Found		motif file (matrix)
9 A G C T T G C A T G C A G C T A A G C T A G C T A G T C A G T C C G T A C T A G 1e-18-4.338e+0118.88%6.59%52.0bp (70.2bp)TEAD1/MA0090.4/Jaspar(0.886)
More Information | Similar Motifs Found		motif file (matrix)
10 A C G T A G C T A T G C G T C A A C G T A C G T A C G T C T G A A G T C C G T A A G T C C A G T 1e-18-4.190e+012.07%0.01%47.9bp (53.1bp)PB0028.1_Hbp1_1/Jaspar(0.661)
More Information | Similar Motifs Found		motif file (matrix)
11 C G T A A C G T A C T G G T A C C T G A A C T G G T A C A G T C T C A G T A C G C T A G C G T A 1e-17-3.925e+012.90%0.08%38.2bp (87.8bp)ZNF549/MA1728.2/Jaspar(0.596)
More Information | Similar Motifs Found		motif file (matrix)
12 A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C T G A C T G A C T G 1e-16-3.799e+011.24%0.00%23.7bp (29.2bp)SOX12/MA1561.2/Jaspar(0.698)
More Information | Similar Motifs Found		motif file (matrix)
13 A C G T A C T G A C G T A C T G A C T G A C T G A G T C A G T C A C G T C T G A A G T C A G T C 1e-16-3.799e+011.24%0.00%23.7bp (0.0bp)ZNF692/MA1986.2/Jaspar(0.707)
More Information | Similar Motifs Found		motif file (matrix)
14 A C T G C G T A A G T C A G T C A C G T A C T G A C T G C G T A A C T G A C G T A G T C A C T G 1e-16-3.799e+011.24%0.00%23.7bp (0.0bp)Nr5A2/MA0505.3/Jaspar(0.639)
More Information | Similar Motifs Found		motif file (matrix)
15 A G T C A G T C C G T A A C T G C G T A A C T G A C G T A G T C A G T C A C T G A C T G A G T C 1e-16-3.799e+011.24%0.00%23.7bp (0.0bp)HNF4G/MA0484.3/Jaspar(0.632)
More Information | Similar Motifs Found		motif file (matrix)
16 A G T C A C T G A G T C A G T C A C T G A C T G A C T G C G T A A C T G A C T G A G T C A C G T 1e-16-3.799e+011.24%0.00%55.4bp (0.0bp)SP5/MA1965.2/Jaspar(0.707)
More Information | Similar Motifs Found		motif file (matrix)
17 T G A C C T G A A C G T C G T A C G T A C G T A C G A T T A G C 1e-16-3.758e+0119.71%7.75%54.9bp (58.5bp)MEIS2/MA1640.2/Jaspar(0.943)
More Information | Similar Motifs Found		motif file (matrix)
18 C G T A C G T A T C G A T G A C C G A T C T A G C T A G A G T C A G T C A G T C 1e-15-3.666e+0111.83%3.26%54.1bp (75.2bp)Yy1/MA0095.4/Jaspar(0.648)
More Information | Similar Motifs Found		motif file (matrix)
19 C G T A A C T G A C T G C G T A A C T G A G T C A C G T A C T G C G T A A C T G A C G T A G T C 1e-14-3.383e+011.24%0.00%23.7bp (11.7bp)MAFK/MA0496.4/Jaspar(0.752)
More Information | Similar Motifs Found		motif file (matrix)
20 A G T C A G C T A G C T A C T G A C T G G T A C G A T C T C A G 1e-13-3.166e+0124.90%12.21%55.1bp (81.0bp)NFIX/MA0671.2/Jaspar(0.907)
More Information | Similar Motifs Found		motif file (matrix)
21 A C T G A C T G G T C A A C T G A G T C A G T C C T A G C T A G A T C G G T A C 1e-12-2.871e+0111.20%3.60%53.9bp (83.9bp)POL013.1_MED-1/Jaspar(0.772)
More Information | Similar Motifs Found		motif file (matrix)
22 * A G T C C G T A A C T G A C G T A C T G A C T G C G T A A C T G A C T G A G T C C G T A C G T A 1e-11-2.749e+011.04%0.00%45.7bp (18.9bp)ZNF354C/MA0130.1/Jaspar(0.645)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C T G A C T G A C T G A C G T A C G T A C G T T A G C A C G T A C G T A C G T A G T C C G T A 1e-11-2.718e+011.66%0.03%44.8bp (37.1bp)ZNF766/MA2098.1/Jaspar(0.748)
More Information | Similar Motifs Found		motif file (matrix)
24 * T C A G C T A G C T A G T C A G C G T A A C T G A C T G C T A G A T C G T A C G 1e-11-2.685e+0128.22%15.67%57.3bp (83.6bp)ZNF148/MA1653.2/Jaspar(0.868)
More Information | Similar Motifs Found		motif file (matrix)
25 * A T C G C G T A A T C G A C G T A T G C G T A C C G T A C T G A C G T A A T G C 1e-11-2.580e+013.11%0.26%37.9bp (68.4bp)PB0134.1_Hnf4a_2/Jaspar(0.654)
More Information | Similar Motifs Found		motif file (matrix)
26 * A C G T C G T A A C G T A C G T A C T G A C G T C G T A A G T C C G T A A G T C 1e-10-2.484e+011.24%0.01%65.2bp (48.7bp)ZBTB32/MA1580.1/Jaspar(0.746)
More Information | Similar Motifs Found		motif file (matrix)
27 * A C T G C G T A C G T A A C T G A C G T A C G T A G T C A C G T A C G T A C T G A C G T A C T G 1e-10-2.404e+011.04%0.01%40.6bp (40.6bp)ZSCAN21/MA2336.1/Jaspar(0.625)
More Information | Similar Motifs Found		motif file (matrix)
28 * G T A C C G T A C G T A G T A C A C G T A C G T A C G T A G T C A C G T A C G T G T C A A C G T 1e-9-2.275e+011.45%0.03%47.9bp (57.7bp)T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer(0.680)
More Information | Similar Motifs Found		motif file (matrix)
29 * A T C G C G T A C T A G C G T A A G T C A C T G A G T C C G T A A C T G A G T C 1e-9-2.239e+012.90%0.28%56.2bp (71.2bp)NHLH2/MA1529.2/Jaspar(0.664)
More Information | Similar Motifs Found		motif file (matrix)
30 * G A T C A C T G G T C A A C T G A T C G A T G C G T A C C G A T A C T G C T G A C T A G A G T C 1e-9-2.151e+012.90%0.30%48.8bp (87.9bp)ZNF257/MA1710.2/Jaspar(0.689)
More Information | Similar Motifs Found		motif file (matrix)
31 * A T C G G T A C A C G T C G A T A T G C C T A G A G T C A C G T 1e-9-2.134e+017.47%2.23%55.5bp (76.0bp)POL008.1_DCE_S_I/Jaspar(0.675)
More Information | Similar Motifs Found		motif file (matrix)
32 * C G T A C G T A A G T C A C T G A C G T A C G T A G T C C G T A A G T C C G T A 1e-6-1.420e+010.62%0.00%61.3bp (55.3bp)NR1I3/MA1534.2/Jaspar(0.676)
More Information | Similar Motifs Found		motif file (matrix)
33 * A C T G A C T G C G T A C G T A A C T G G T C A A C T G A G T C 1e-5-1.324e+016.02%2.21%63.8bp (77.6bp)ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer(0.863)
More Information | Similar Motifs Found		motif file (matrix)