Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region_human/call_motif/Lymphatic_vessel_endothelial_cells/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 181
Total background sequences = 90124
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C C G T A A C T G T G A C A C G T A T C G A G C T A C G T A C G T A G T C A G T C A G C T 1e-113-2.615e+0232.04%0.16%49.3bp (76.5bp)ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer(0.980)
More Information | Similar Motifs Found		motif file (matrix)
2 C G T A G T A C G C T A A C T G C A T G T C G A T G C A T C G A G C A T C A G T C A G T A G T C 1e-37-8.710e+0127.07%2.19%48.8bp (70.0bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.887)
More Information | Similar Motifs Found		motif file (matrix)
3 T A C G C G T A A C T G A C T G G T C A C G T A C T A G A C G T A T C G C T G A G A T C G T A C 1e-20-4.797e+0112.15%0.63%50.1bp (81.6bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.881)
More Information | Similar Motifs Found		motif file (matrix)
4 C G A T A C G T C A G T A G C T A G T C G T A C G T C A C T G A 1e-13-3.089e+0136.46%13.98%45.4bp (71.7bp)Nfatc1/MA0624.3/Jaspar(0.859)
More Information | Similar Motifs Found		motif file (matrix)
5 C G T A A G T C A C T G A C T G A T G C A G C T A C T G C G T A A G T C A C G T A C T G A G C T 1e-12-2.807e+012.21%0.00%48.5bp (0.9bp)Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer(0.652)
More Information | Similar Motifs Found		motif file (matrix)
6 * G T A C C G T A A C G T C T A G C T A G A T C G A C G T A C G T A C T G T A C G C G T A C G T A 1e-11-2.651e+016.08%0.26%51.5bp (79.5bp)Nfatc1/MA0624.3/Jaspar(0.674)
More Information | Similar Motifs Found		motif file (matrix)
7 * G T C A C T A G A C G T T C A G C G T A A G T C A G C T G T A C C G T A A C G T 1e-11-2.582e+015.52%0.20%54.5bp (61.4bp)Jun/MA0489.3/Jaspar(0.874)
More Information | Similar Motifs Found		motif file (matrix)
8 * A C G T A C G T A G T C T A G C G T A C C G A T A C T G A T G C C G A T T C G A A C G T C G T A 1e-11-2.555e+014.42%0.09%69.7bp (67.8bp)Zic3/MA0697.3/Jaspar(0.637)
More Information | Similar Motifs Found		motif file (matrix)
9 * A T G C C G T A A T C G T A G C A C G T A C T G C G A T G T C A G T A C A G T C 1e-11-2.547e+0112.71%2.11%64.9bp (77.2bp)Ptf1A/MA1619.2/Jaspar(0.748)
More Information | Similar Motifs Found		motif file (matrix)
10 * C G T A T G C A A G T C C G T A A C T G C T A G C G T A A C G T T C A G A G C T 1e-10-2.524e+016.08%0.29%54.3bp (68.0bp)SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer(0.861)
More Information | Similar Motifs Found		motif file (matrix)
11 * A C T G A G T C A C G T A C G T A G T C A G T C C G A T A C T G A T G C G T C A A C G T A C G T 1e-8-2.064e+014.42%0.17%36.2bp (82.9bp)ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer(0.754)
More Information | Similar Motifs Found		motif file (matrix)
12 * A C T G A C T G A C G T A C T G C G T A C G T A A G T C A C T G G T A C C T A G 1e-8-1.912e+012.76%0.03%62.7bp (89.6bp)Vdr/MA0693.4/Jaspar(0.636)
More Information | Similar Motifs Found		motif file (matrix)
13 * C G T A A C G T A T C G C G T A A T G C G T C A A G T C A G T C G T C A A C T G A C G T A C G T 1e-8-1.864e+012.76%0.04%51.6bp (45.1bp)PH0164.1_Six4/Jaspar(0.660)
More Information | Similar Motifs Found		motif file (matrix)
14 * C G A T C G A T A C G T A T G C A G T C G C T A C G A T C G A T A C T G C A T G C T G A C G T A 1e-7-1.804e+017.18%0.90%35.0bp (75.8bp)NFATC2(RHD)/Islets-NFATC2-ChIP-Seq(GSE158496)/Homer(0.768)
More Information | Similar Motifs Found		motif file (matrix)
15 * A C G T A T G C A G T C G T A C G T A C A G C T C G T A A C T G A C T G A C T G 1e-7-1.773e+015.52%0.47%53.2bp (74.9bp)Ebf4/MA2122.1/Jaspar(0.833)
More Information | Similar Motifs Found		motif file (matrix)
16 * A C T G T G C A C G T A A G T C C G T A G T C A A C G T A C T G A C T G C G T A 1e-7-1.738e+014.97%0.36%49.2bp (84.1bp)Sox7/MA2095.1/Jaspar(0.915)
More Information | Similar Motifs Found		motif file (matrix)
17 * C G A T C A T G C A G T G T A C T G A C C A T G T C A G G T C A 1e-6-1.607e+0120.99%8.34%58.4bp (80.9bp)PB0060.1_Smad3_1/Jaspar(0.713)
More Information | Similar Motifs Found		motif file (matrix)
18 * A C G T T C A G A C T G C T G A G T C A T G C A A C G T C T A G T A C G G T A C A G T C A G T C 1e-6-1.597e+016.63%0.90%58.0bp (77.1bp)Plagl1/MA1615.2/Jaspar(0.689)
More Information | Similar Motifs Found		motif file (matrix)
19 * A C T G A C T G C A G T A T C G C G A T A C T G A C T G A G T C C G T A A C T G A C T G C G T A 1e-4-1.036e+011.10%0.00%65.7bp (6.3bp)Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer(0.692)
More Information | Similar Motifs Found		motif file (matrix)