Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region_human/call_motif/Lung_and_airway/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 546
Total background sequences = 93162
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G C T A T C G A C G T A C A T G A G C T G T C A C G T A C T G A A G T C C G T A A T C G C G A T 1e-131-3.026e+0235.71%3.72%46.2bp (63.2bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.942)
More Information | Similar Motifs Found		motif file (matrix)
2 T A C G G A T C G T C A A G T C G A C T G A C T T C A G C G T A T C A G G C T A 1e-108-2.501e+0249.63%11.23%50.0bp (71.7bp)NKX2-8/MA0673.2/Jaspar(0.932)
More Information | Similar Motifs Found		motif file (matrix)
3 C A T G T A G C C G T A A C T G A C T G C G T A C G T A A C G T A C T G A G T C 1e-82-1.891e+0236.26%7.35%50.2bp (66.4bp)TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer(0.917)
More Information | Similar Motifs Found		motif file (matrix)
4 C G T A A C T G A C G T C G T A A G T C G T C A A G T C A C G T A C G T A C T G 1e-32-7.449e+013.85%0.05%53.2bp (62.6bp)Nkx2-1/MA1994.2/Jaspar(0.710)
More Information | Similar Motifs Found		motif file (matrix)
5 C G T A C G T A A C T G C G T A A T C G C T A G A C T G A G T C A G T C C G T A C G T A A T C G 1e-31-7.348e+013.66%0.04%54.6bp (80.8bp)RORg(NR)/Liver-Rorc-ChIP-Seq(GSE101115)/Homer(0.621)
More Information | Similar Motifs Found		motif file (matrix)
6 C G T A C G A T C G T A A G T C T C A G A G C T A C G T A C T G A C T G A G T C C G T A A C G T 1e-25-5.914e+011.65%0.00%37.4bp (32.7bp)Hic1/MA0739.2/Jaspar(0.781)
More Information | Similar Motifs Found		motif file (matrix)
7 A C G T A C G T C T A G G T C A A G T C A G C T A C G T A C T G A C T G A C T G A C T G A C G T 1e-25-5.907e+013.11%0.04%49.8bp (73.5bp)Nr2e1/MA0676.1/Jaspar(0.686)
More Information | Similar Motifs Found		motif file (matrix)
8 C G T A A C T G A G T C T C G A G T A C T G A C A C G T G T C A 1e-23-5.314e+0112.09%2.69%55.6bp (67.0bp)POL010.1_DCE_S_III/Jaspar(0.703)
More Information | Similar Motifs Found		motif file (matrix)
9 A C G T C G A T A G C T G T C A A T C G C G T A A C T G A G T C C G T A C T A G C T A G C G T A 1e-21-4.903e+012.93%0.06%35.7bp (77.5bp)Zic1::Zic2/MA1628.2/Jaspar(0.630)
More Information | Similar Motifs Found		motif file (matrix)
10 A G C T A C G T A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G C T A A C T G 1e-19-4.590e+012.38%0.03%70.3bp (96.6bp)ZNF257/MA1710.2/Jaspar(0.649)
More Information | Similar Motifs Found		motif file (matrix)
11 C G T A T C G A C G T A C A T G A G C T A C G T A C G T T G C A A C G T C A G T G T C A C T G A 1e-18-4.319e+016.04%0.75%50.8bp (60.6bp)Foxq1/MA0040.2/Jaspar(0.657)
More Information | Similar Motifs Found		motif file (matrix)
12 C T A G G T A C G T C A C G A T C G T A C T G A A C T G C T A G G A T C C G T A A C T G G T C A 1e-17-4.005e+013.30%0.16%44.9bp (64.1bp)PB0128.1_Gcm1_2/Jaspar(0.609)
More Information | Similar Motifs Found		motif file (matrix)
13 C G T A T C A G A C G T C T A G A G T C A C G T A C T G C G T A C G T A C G T A A G T C G T C A 1e-14-3.372e+011.65%0.02%45.9bp (46.9bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.711)
More Information | Similar Motifs Found		motif file (matrix)
14 A C T G C G T A A C T G A C G T A C T G C G T A C T G A C G T A A C T G A C G T 1e-13-3.137e+013.11%0.23%35.7bp (67.4bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.861)
More Information | Similar Motifs Found		motif file (matrix)
15 A C G T A G T C C G T A C T G A T C A G A T G C C G T A A T C G 1e-13-3.006e+0115.93%6.71%58.0bp (72.3bp)TCF7/MA0769.3/Jaspar(0.670)
More Information | Similar Motifs Found		motif file (matrix)
16 * G T A C A C G T T G A C C G T A A C G T A C T G A G T C G T A C C G T A C T G A A C T G G T A C 1e-11-2.567e+011.28%0.02%66.4bp (53.3bp)NFIC/MA0161.3/Jaspar(0.823)
More Information | Similar Motifs Found		motif file (matrix)
17 * C T A G C T A G G T A C C G T A A C T G C G T A A T C G C A G T A T C G T A G C 1e-11-2.542e+014.95%0.96%52.1bp (74.7bp)ZNF768/MA1731.2/Jaspar(0.660)
More Information | Similar Motifs Found		motif file (matrix)
18 * T C A G C A G T C A T G T A C G A T G C A G T C C G A T C A T G A C T G T G A C 1e-10-2.425e+0110.99%4.22%53.1bp (78.3bp)Hand1/MA2123.1/Jaspar(0.737)
More Information | Similar Motifs Found		motif file (matrix)
19 * A C T G A C T G C G T A C G T A C G T A A C T G A C T G A T G C A C T G C G T A C G T A A C G T 1e-9-2.158e+010.92%0.01%34.7bp (64.3bp)ZNF184/MA2120.1/Jaspar(0.747)
More Information | Similar Motifs Found		motif file (matrix)
20 * A G T C G A C T G T A C C G A T A T C G C T G A A C T G T C A G 1e-9-2.083e+0125.09%15.11%57.2bp (75.4bp)TFAP2A/MA0003.5/Jaspar(0.729)
More Information | Similar Motifs Found		motif file (matrix)
21 * A C T G A C T G A G T C C G T A C G T A C T A G A G C T A C G T A C G T C G A T 1e-8-2.011e+012.56%0.30%52.4bp (71.8bp)SD0002.1_at_AC_acceptor/Jaspar(0.781)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C T G A C T G A C T G A C T G C G T A C G T A A C G T A G T C G T C A C G T A 1e-5-1.365e+011.28%0.09%49.2bp (69.2bp)RELB/MA1117.2/Jaspar(0.827)
More Information | Similar Motifs Found		motif file (matrix)
23 * A T G C C G A T C A G T G T C A G A C T C G A T A T G C A G C T G C A T T A G C 1e-2-6.778e+001.65%0.46%37.8bp (80.7bp)Spi1/MA0080.7/Jaspar(0.669)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C G T A T G C A C G T C G A T A G T C A C T G A C G T A G T C 1e-1-3.623e+001.10%0.41%52.3bp (68.9bp)PB0108.1_Atf1_2/Jaspar(0.703)
More Information | Similar Motifs Found		motif file (matrix)