Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region_human/call_motif/Liver_sinusoidal_endothelial_cells/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2931
Total background sequences = 90338
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G C T G A T A G C T G C A T A C G A T C G T G C A G C T A T C G A A G C T 1e-1259-2.900e+0377.00%14.42%49.7bp (72.3bp)Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.979)
More Information | Similar Motifs Found		motif file (matrix)
2 A T G C A G C T C G A T G C T A C G A T A G T C C G A T A T C G T G A C T C A G 1e-509-1.174e+0350.12%13.00%50.4bp (63.4bp)Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer(0.976)
More Information | Similar Motifs Found		motif file (matrix)
3 C T G A T C G A C T G A G A T C G T C A G T C A G A C T T C A G T A C G A G T C 1e-67-1.549e+0210.82%3.50%52.0bp (61.7bp)SRY/MA0084.2/Jaspar(0.957)
More Information | Similar Motifs Found		motif file (matrix)
4 C T G A C T G A A C T G A C T G A C G T A G T C C G T A T A G C G T A C T A G C 1e-66-1.537e+0217.95%7.99%54.6bp (68.0bp)NR2C1/MA1535.2/Jaspar(0.955)
More Information | Similar Motifs Found		motif file (matrix)
5 A G T C T G A C C G A T C T A G T C G A T A C G G C A T G A T C T C G A A G T C 1e-63-1.458e+028.09%2.19%54.5bp (64.5bp)JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer(0.961)
More Information | Similar Motifs Found		motif file (matrix)
6 G T C A T C G A A T G C A G C T A C G T A G T C T A G C A C G T G A C T T C A G 1e-39-9.174e+014.09%0.91%41.0bp (119.7bp)POL010.1_DCE_S_III/Jaspar(0.708)
More Information | Similar Motifs Found		motif file (matrix)
7 T G C A C T G A C G T A A G T C G T C A C T A G A T G C A T G C 1e-30-7.094e+0111.77%6.03%56.1bp (65.8bp)ZNF341/MA1655.2/Jaspar(0.839)
More Information | Similar Motifs Found		motif file (matrix)
8 G A T C C G A T A C T G A T G C A T G C T C G A T C G A T C G A G C A T T C A G 1e-23-5.523e+0111.98%6.76%53.8bp (66.3bp)NFIA/MA0670.2/Jaspar(0.821)
More Information | Similar Motifs Found		motif file (matrix)
9 A G T C A C G T A C T G C G T A A C T G A C T G A C T G A G T C A G T C A G T C A C G T A C G T 1e-21-4.943e+010.34%0.00%40.1bp (0.0bp)PLAGL2/MA1548.2/Jaspar(0.665)
More Information | Similar Motifs Found		motif file (matrix)
10 T G C A T G C A C G T A C A T G C A T G T A C G C G A T A T G C G C A T T C A G C G A T A C T G 1e-20-4.668e+010.51%0.01%45.0bp (46.8bp)KLF17/MA1514.2/Jaspar(0.620)
More Information | Similar Motifs Found		motif file (matrix)
11 A C T G A C T G A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C G T A C G T C G T A 1e-18-4.370e+010.31%0.00%53.5bp (51.4bp)Hand1/MA2123.1/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
12 A C T G A C G T A G T C A C G T A G T C T C A G A C T G A C G T A C T G A C G T C G T A C G T A 1e-16-3.851e+010.34%0.00%62.7bp (34.6bp)Rhox11/MA0629.2/Jaspar(0.593)
More Information | Similar Motifs Found		motif file (matrix)
13 C G T A C G T A A C G T A C G T A C G T C G T A A C T G C G T A A C T G A C T G A C T G C G T A 1e-16-3.749e+010.31%0.00%17.4bp (58.1bp)E2F7/MA0758.1/Jaspar(0.607)
More Information | Similar Motifs Found		motif file (matrix)
14 C G A T C G T A C G T A C T A G C T G A C T A G T A C G G T C A C G T A T A C G A T C G A T G C 1e-15-3.668e+011.50%0.32%48.4bp (72.6bp)Spi1/MA0080.7/Jaspar(0.686)
More Information | Similar Motifs Found		motif file (matrix)
15 A C G T A C G T C G T A A C T G A C G T A T G C A G T C C G T A C G T A A T C G 1e-14-3.245e+010.65%0.05%48.3bp (52.7bp)PB0134.1_Hnf4a_2/Jaspar(0.630)
More Information | Similar Motifs Found		motif file (matrix)
16 * G C T A A T C G A C T G G T C A T G C A C A T G T A C G G A C T A G T C A C G T 1e-11-2.643e+012.15%0.78%52.0bp (68.3bp)Ppara/MA2338.1/Jaspar(0.659)
More Information | Similar Motifs Found		motif file (matrix)
17 * A T C G C T G A A G T C G T C A G A T C C T A G A C T G A C T G T A G C A T C G C T A G A T C G 1e-5-1.224e+010.31%0.04%54.0bp (63.0bp)HEY1/MA0823.1/Jaspar(0.741)
More Information | Similar Motifs Found		motif file (matrix)