Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region_human/call_motif/Endothelium/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 582
Total background sequences = 5476
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C G A G A T C C G A T A C G T G A T C G T A C G C A T A C T G A G C T A G T C 1e-246-5.669e+0266.15%9.25%52.1bp (85.0bp)ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer(0.943)
More Information | Similar Motifs Found		motif file (matrix)
2 T C G A C G T A A G T C C G T A C G T A C G A T T C A G T A C G 1e-57-1.335e+0242.27%14.58%53.5bp (66.2bp)Sox3/MA0514.3/Jaspar(0.982)
More Information | Similar Motifs Found		motif file (matrix)
3 C G T A C G T A C G T A A G T C T C G A A C T G A T C G G T A C 1e-52-1.205e+0223.88%5.08%59.1bp (78.9bp)FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer(0.797)
More Information | Similar Motifs Found		motif file (matrix)
4 C T A G C T A G G T C A C G T A C T G A A T G C A G T C A G C T T G A C C G T A A C T G C T A G 1e-26-6.026e+012.92%0.05%42.2bp (72.3bp)TFAP2A/MA0003.5/Jaspar(0.773)
More Information | Similar Motifs Found		motif file (matrix)
5 A T G C C G A T C T A G A C G T A G T C A C G T A T C G A C T G G T C A C G T A A T C G A G T C 1e-21-4.853e+013.09%0.09%56.9bp (40.3bp)Hand1::Tcf3/MA0092.2/Jaspar(0.720)
More Information | Similar Motifs Found		motif file (matrix)
6 T C A G G T C A T C G A A C T G T A G C G T A C C G A T A C T G A C G T T G C A A G T C T A C G 1e-20-4.710e+012.06%0.01%26.0bp (7.7bp)POL008.1_DCE_S_I/Jaspar(0.645)
More Information | Similar Motifs Found		motif file (matrix)
7 A G T C G T A C A C G T A C T G G T A C A C G T A C T G A G T C C G T A C T A G 1e-18-4.350e+013.26%0.16%56.8bp (38.4bp)Zic3/MA0697.3/Jaspar(0.833)
More Information | Similar Motifs Found		motif file (matrix)
8 A G T C A C T G A T G C A C T G A C T G A C G T A C T G A C T G C G T A A G T C 1e-18-4.301e+012.23%0.05%32.8bp (11.3bp)ZNF354C/MA0130.1/Jaspar(0.711)
More Information | Similar Motifs Found		motif file (matrix)
9 A G T C C G T A A G T C C G T A A G T C A G T C A G T C A G T C A C G T C G T A A C G T A C G T 1e-18-4.235e+011.89%0.03%29.9bp (33.6bp)KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer(0.712)
More Information | Similar Motifs Found		motif file (matrix)
10 C T A G A C G T A C G T A C T G A C G T A C T G C G T A C G T A A C G T A G T C 1e-16-3.888e+012.06%0.05%34.3bp (41.9bp)Tbx6/MA1567.3/Jaspar(0.708)
More Information | Similar Motifs Found		motif file (matrix)
11 G T A C A G T C G T C A A G T C A G C T A G T C T G A C A T G C 1e-16-3.862e+0130.24%16.14%57.4bp (87.9bp)MAZ/MA1522.2/Jaspar(0.854)
More Information | Similar Motifs Found		motif file (matrix)
12 C G T A A C T G A C G T A G T C A C T G A C G T A C T G A G T C A C G T A C T G C G T A A C T G 1e-16-3.770e+011.72%0.00%23.0bp (0.0bp)PB0207.1_Zic3_2/Jaspar(0.692)
More Information | Similar Motifs Found		motif file (matrix)
13 A C T G A G T C A C G T A G T C A C G T A C T G C G T A C G T A C A G T A C G T A C T G A C G T 1e-16-3.770e+011.72%0.01%31.5bp (15.2bp)Gfi1B/MA0483.2/Jaspar(0.637)
More Information | Similar Motifs Found		motif file (matrix)
14 A G T C G C A T T A C G C T G A C T A G T C A G C G T A T C A G T C G A C A G T T A C G G T A C 1e-15-3.482e+011.89%0.04%57.9bp (36.8bp)ZNF816/MA1719.2/Jaspar(0.632)
More Information | Similar Motifs Found		motif file (matrix)
15 A T G C G T C A A G T C T A G C G T C A A T C G T A G C A G C T A G C T A G T C G A C T A T C G 1e-14-3.411e+012.06%0.06%46.0bp (29.0bp)OSR2/MA1646.2/Jaspar(0.693)
More Information | Similar Motifs Found		motif file (matrix)
16 A G T C A G C T G T C A A C T G A C T G C G T A A G T C C G T A C G T A A G T C 1e-13-3.086e+011.72%0.05%34.2bp (7.9bp)SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer(0.656)
More Information | Similar Motifs Found		motif file (matrix)
17 T A C G G A T C G T A C C G T A T C A G T A G C C T A G A T C G T C G A G T C A C T G A A G C T 1e-12-2.962e+012.58%0.17%58.4bp (47.3bp)ETV2/MA0762.2/Jaspar(0.670)
More Information | Similar Motifs Found		motif file (matrix)
18 T G C A C T G A A C T G A T G C A T G C G C A T A C T G A T G C T A G C C G A T T A C G A T C G 1e-12-2.930e+0127.32%15.46%52.7bp (91.7bp)ZNF213/MA2121.1/Jaspar(0.667)
More Information | Similar Motifs Found		motif file (matrix)
19 * G A T C G C A T A G C T C A G T C A T G A G T C G T A C G T A C C T G A T C A G T A C G T A G C 1e-11-2.699e+011.55%0.04%22.4bp (25.1bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.747)
More Information | Similar Motifs Found		motif file (matrix)
20 * A C T G C G T A C G T A A C G T A G T C A C T G A C G T C G T A 1e-11-2.699e+011.55%0.05%13.1bp (17.8bp)HOXA9/MA0594.3/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)
21 * A T C G A C T G A G T C A T G C C G T A A C T G C G T A C T A G 1e-9-2.162e+0119.76%10.97%58.9bp (84.8bp)BCL11A/MA2324.1/Jaspar(0.788)
More Information | Similar Motifs Found		motif file (matrix)
22 * C T A G A G T C A G T C A C T G A T C G C G T A A C G T A C T G 1e-9-2.144e+012.92%0.42%55.7bp (79.4bp)SPDEF/MA0686.2/Jaspar(0.856)
More Information | Similar Motifs Found		motif file (matrix)
23 * A C G T A C T G C T G A G T C A C G T A C G T A A G T C C G T A C G T A C T G A 1e-8-1.928e+012.06%0.22%56.6bp (23.1bp)PB0018.1_Foxk1_1/Jaspar(0.775)
More Information | Similar Motifs Found		motif file (matrix)
24 * A G C T A C T G A C G T C G A T A C T G A C T G A G T C A C G T 1e-7-1.747e+013.95%0.98%54.5bp (66.4bp)NFIX/MA0671.2/Jaspar(0.730)
More Information | Similar Motifs Found		motif file (matrix)
25 * G T A C A C G T C G T A A C G T A C G T G T A C A G T C A G T C 1e-6-1.486e+013.09%0.72%60.1bp (42.1bp)RELB/MA1117.2/Jaspar(0.811)
More Information | Similar Motifs Found		motif file (matrix)
26 * A G T C A C G T A C T G A G T C A G T C C G T A C G T A G T C A 1e-5-1.370e+015.15%1.89%45.9bp (69.3bp)NFIA/MA0670.2/Jaspar(0.878)
More Information | Similar Motifs Found		motif file (matrix)
27 * A C G T A C T G A G C T A C T G A G T C A C T G A C G T C G A T 1e-5-1.269e+011.37%0.15%38.4bp (34.0bp)PB0208.1_Zscan4_2/Jaspar(0.675)
More Information | Similar Motifs Found		motif file (matrix)
28 * C T G A A C T G A G T C C G T A C T G A A C G T A G T C C G A T 1e-5-1.238e+015.33%2.13%59.8bp (70.7bp)Nanog/MA2339.1/Jaspar(0.820)
More Information | Similar Motifs Found		motif file (matrix)