Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region_human/call_motif/Endocardial_cells/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1525
Total background sequences = 94854
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A C T G T A G C G A T C C T G A C T G A T C A G T C G A G C T A G T C A G T C A C T G A G A T C 1e-973-2.241e+0341.84%0.60%47.8bp (70.4bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.884)
More Information | Similar Motifs Found		motif file (matrix)
2 A T C G A T G C A G C T A C G T C G T A A C G T A G T C G C A T 1e-113-2.621e+0232.98%11.11%53.2bp (61.6bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.982)
More Information | Similar Motifs Found		motif file (matrix)
3 C G A T A C G T G T A C G A T C C G T A T C A G T C A G T C G A G C T A C T G A 1e-105-2.440e+0247.93%22.34%53.7bp (68.5bp)Stat4/MA0518.2/Jaspar(0.841)
More Information | Similar Motifs Found		motif file (matrix)
4 A G C T A C G T A C T G A T G C A G T C C G T A T C A G T A C G 1e-97-2.250e+0247.80%23.11%52.5bp (69.7bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.955)
More Information | Similar Motifs Found		motif file (matrix)
5 T G C A G T C A G C T A A T G C G T C A T C A G C A G T T A C G 1e-91-2.095e+0252.13%27.47%53.7bp (68.0bp)Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer(0.844)
More Information | Similar Motifs Found		motif file (matrix)
6 T C A G C A T G T C A G C T G A T C G A C G T A G A C T T C A G C G A T A C G T 1e-31-7.187e+0150.30%35.60%56.2bp (65.0bp)GFY(?)/Promoter/Homer(0.682)
More Information | Similar Motifs Found		motif file (matrix)
7 C T A G T C A G T C G A G C T A C G T A A T C G G A T C C G A T C A T G A T G C T G A C G C T A 1e-29-6.805e+017.61%2.17%50.1bp (72.2bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.784)
More Information | Similar Motifs Found		motif file (matrix)
8 A C G T C G T A A C T G C G T A A C T G A T G C A G T C C T G A C G T A A C T G A C G T A C T G 1e-24-5.540e+010.72%0.00%55.9bp (38.3bp)SD0002.1_at_AC_acceptor/Jaspar(0.664)
More Information | Similar Motifs Found		motif file (matrix)
9 T G C A C A T G A C T G C G T A C G T A C A T G A G C T T A C G C T G A C T A G 1e-20-4.636e+015.11%1.45%49.8bp (68.6bp)ZKSCAN5/MA1652.2/Jaspar(0.768)
More Information | Similar Motifs Found		motif file (matrix)
10 C T A G C T G A G C A T G C T A C T A G T A G C C G T A A T C G G A T C A G T C 1e-17-4.075e+016.49%2.38%50.7bp (65.9bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.633)
More Information | Similar Motifs Found		motif file (matrix)
11 C A G T G C A T A G T C C A T G A T C G C G T A G A T C T G C A 1e-17-3.918e+0115.02%8.36%57.3bp (67.5bp)MEIS1/MA0498.3/Jaspar(0.708)
More Information | Similar Motifs Found		motif file (matrix)
12 A G T C A G T C A C G T C T G A A C G T C A G T A C T G A C T G A G T C A G T C C G T A G T C A 1e-16-3.710e+010.66%0.01%31.7bp (27.1bp)NFY(CCAAT)/Promoter/Homer(0.688)
More Information | Similar Motifs Found		motif file (matrix)
13 C G T A A C T G A C T G A C T G A G T C C T A G A G T C A C G T A C T G C G T A A C G T A C G T 1e-15-3.536e+010.85%0.03%61.0bp (76.8bp)ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer(0.687)
More Information | Similar Motifs Found		motif file (matrix)
14 A C T G A C T G A G C T A C T G A G T C T C G A A C G T A C G T A G C T C T G A G T A C C G T A 1e-14-3.289e+011.11%0.07%61.0bp (64.0bp)ZNF547/MA2334.1/Jaspar(0.652)
More Information | Similar Motifs Found		motif file (matrix)
15 C G T A C G T A A T G C A G T C A G T C A C G T A C T G C T G A A C T G A G T C A C G T C G T A 1e-13-3.183e+010.79%0.03%58.8bp (42.9bp)ZBTB6/MA1581.2/Jaspar(0.661)
More Information | Similar Motifs Found		motif file (matrix)
16 C T A G A C G T A C G T A C G T C G T A A G T C C T A G A G C T 1e-13-3.024e+013.41%1.00%52.5bp (59.3bp)FOXI1/MA0042.2/Jaspar(0.820)
More Information | Similar Motifs Found		motif file (matrix)
17 C G T A A G T C G T C A A G T C C G T A G T C A C G T A A T C G A C T G A C G T A C G T A G T C 1e-12-2.959e+010.85%0.04%50.7bp (68.3bp)PB0168.1_Sox14_2/Jaspar(0.693)
More Information | Similar Motifs Found		motif file (matrix)
18 A C G T A C T G C G T A A T G C A C G T G T A C C T G A A C G T 1e-12-2.827e+016.30%2.79%55.5bp (63.8bp)Jun/MA0489.3/Jaspar(0.991)
More Information | Similar Motifs Found		motif file (matrix)
19 * A C G T C G T A A C T G C G T A A C G T C G T A A G T C C G T A C T A G C G T A A C T G A C G T 1e-10-2.529e+010.59%0.02%38.3bp (47.6bp)DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer(0.658)
More Information | Similar Motifs Found		motif file (matrix)
20 * A G C T C G A T G C A T C A T G A G C T A T G C T G C A A C T G A G T C A C G T 1e-10-2.529e+018.39%4.43%57.0bp (68.6bp)Twist2/MA0633.3/Jaspar(0.778)
More Information | Similar Motifs Found		motif file (matrix)
21 * C G A T A G T C C G A T A C T G C G T A C T G A A G C T G A C T C G T A A G T C A C G T A C T G 1e-10-2.480e+011.44%0.22%52.8bp (60.0bp)MF0010.1_Homeobox_class/Jaspar(0.692)
More Information | Similar Motifs Found		motif file (matrix)
22 * A C T G G A T C A T G C C T A G C T G A A C G T C A G T T C A G A T C G G A C T 1e-10-2.379e+013.48%1.23%55.8bp (66.1bp)NFY(CCAAT)/Promoter/Homer(0.765)
More Information | Similar Motifs Found		motif file (matrix)
23 * C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C C G T A A G T C A G T C C G T A 1e-9-2.202e+010.33%0.00%6.8bp (36.3bp)KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer(0.686)
More Information | Similar Motifs Found		motif file (matrix)
24 * C A T G A G T C A C T G A T G C G C A T A C G T G C A T A G T C 1e-8-1.983e+015.38%2.63%55.1bp (65.7bp)IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer(0.761)
More Information | Similar Motifs Found		motif file (matrix)
25 * A C T G A C T G A C G T A G T C A C G T A T G C C G T A A C T G A C T G C G T A A C T G A T G C 1e-8-1.972e+010.26%0.00%36.5bp (0.0bp)TFAP2C/MA0814.3/Jaspar(0.613)
More Information | Similar Motifs Found		motif file (matrix)
26 * A G T C A T C G A G C T C G A T C G A T G T C A A G T C C G T A G T C A A C G T 1e-8-1.894e+011.57%0.37%48.5bp (59.9bp)SRY/MA0084.2/Jaspar(0.749)
More Information | Similar Motifs Found		motif file (matrix)
27 * A G C T C A T G A G C T T C A G G A C T A T G C A C T G A G C T A G T C A G T C 1e-1-3.520e+000.33%0.11%62.8bp (65.1bp)GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer(0.677)
More Information | Similar Motifs Found		motif file (matrix)