Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region/call_motif/T_cells/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2370
Total background sequences = 92080
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T A C G A G T C G A T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T 1e-657-1.514e+0339.28%3.81%47.5bp (71.7bp)Erg/MA0474.4/Jaspar(0.961)
More Information | Similar Motifs Found		motif file (matrix)
2 T G C A T A C G T G A C G C A T C T A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C 1e-426-9.815e+0253.59%14.64%49.2bp (76.4bp)ASCL1/MA1100.3/Jaspar(0.949)
More Information | Similar Motifs Found		motif file (matrix)
3 G C T A C T G A T G C A A G T C A G T C C G T A A G T C C G T A G A C T A G T C A T G C G T C A 1e-339-7.807e+0226.84%3.75%48.7bp (72.4bp)RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer(0.963)
More Information | Similar Motifs Found		motif file (matrix)
4 A G T C A C G T A G C T C G A T T A C G C T G A C G T A T A C G G A C T T A C G 1e-133-3.074e+0221.10%5.96%51.9bp (68.3bp)TCF7L2/MA0523.2/Jaspar(0.948)
More Information | Similar Motifs Found		motif file (matrix)
5 C G A T A C T G A G C T C A G T G C T A A C G T A T G C G C T A T C G A T G C A 1e-44-1.028e+0243.71%29.98%55.4bp (69.1bp)GATA5/MA0766.3/Jaspar(0.768)
More Information | Similar Motifs Found		motif file (matrix)
6 C T A G T G A C C G T A A T C G T G A C C G T A C T A G T C G A C A T G A C T G C G A T A C T G 1e-35-8.170e+0112.78%5.86%54.4bp (75.9bp)Zic3/MA0697.3/Jaspar(0.583)
More Information | Similar Motifs Found		motif file (matrix)
7 T A G C A G T C G A T C G A T C G A T C G T A C G T A C G T A C G A T C G A T C G T A C G A T C 1e-26-6.102e+0117.76%10.42%55.6bp (73.2bp)PB0097.1_Zfp281_1/Jaspar(0.912)
More Information | Similar Motifs Found		motif file (matrix)
8 C T G A C T G A T G A C G A C T C A T G G A C T G A T C T C G A 1e-22-5.270e+0124.39%16.38%55.0bp (68.6bp)MF0009.1_TRP(MYB)_class/Jaspar(0.852)
More Information | Similar Motifs Found		motif file (matrix)
9 C T A G C A T G A C G T C A G T G A C T C G T A G T C A T A G C 1e-17-4.049e+018.82%4.63%57.1bp (70.4bp)MYBL2/MA0777.1/Jaspar(0.788)
More Information | Similar Motifs Found		motif file (matrix)
10 C G T A A C G T A C G T C G T A A C G T A C T G A C T G C G T A A C T G A C G T A C G T C G T A 1e-17-3.992e+010.34%0.00%54.3bp (35.2bp)ZBTB26/MA1579.2/Jaspar(0.629)
More Information | Similar Motifs Found		motif file (matrix)
11 A C G T G T C A A C G T C G A T A C G T A G T C C G A T A C T G A C G T A T C G A G T C C A G T 1e-17-3.925e+010.72%0.03%40.7bp (53.7bp)ZNF416/MA1979.2/Jaspar(0.676)
More Information | Similar Motifs Found		motif file (matrix)
12 C A G T C A G T C G T A G T C A A G T C C G T A A T C G T G C A C G T A C T A G A G T C A G C T 1e-16-3.734e+011.43%0.22%61.7bp (62.1bp)OSR2/MA1646.2/Jaspar(0.796)
More Information | Similar Motifs Found		motif file (matrix)
13 T G C A C A G T C G A T A G C T A C T G A C G T A G T C C G T A A T G C T G C A 1e-15-3.640e+016.71%3.29%55.9bp (65.1bp)MEIS1/MA0498.3/Jaspar(0.827)
More Information | Similar Motifs Found		motif file (matrix)
14 A G C T A G T C A C G T A C T G C G T A C G T A A G T C A G C T C G T A A C T G A G T C A G T C 1e-15-3.575e+010.42%0.01%55.4bp (13.1bp)ZKSCAN3/MA1973.2/Jaspar(0.644)
More Information | Similar Motifs Found		motif file (matrix)
15 C G T A A G T C A C G T A G T C C G T A A C T G A G T C C G T A C G T A A C T G A C G T A C G T 1e-14-3.383e+010.46%0.01%46.6bp (70.7bp)PB0042.1_Mafk_1/Jaspar(0.714)
More Information | Similar Motifs Found		motif file (matrix)
16 C G T A C G T A G T C A A C T G A C T G A C T G A G T C A G T C C G T A A G T C 1e-12-2.968e+011.05%0.15%53.2bp (68.3bp)ZBTB9(Zf)/HEK293T-ZBTB9-ChIP-Seq(GSE251687)/Homer(0.666)
More Information | Similar Motifs Found		motif file (matrix)
17 C T A G A G C T A G T C A C G T T C G A C G T A G C T A A G T C A T G C C T G A 1e-12-2.910e+011.35%0.26%50.2bp (66.9bp)CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer(0.717)
More Information | Similar Motifs Found		motif file (matrix)
18 A G C T C G T A C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T A G T C C G T A 1e-12-2.857e+010.25%0.00%59.8bp (37.2bp)PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer(0.633)
More Information | Similar Motifs Found		motif file (matrix)
19 * C G T A A C T G A C G T A G T C A C T G A C T G A C G T A C G T A G T C A C T G 1e-10-2.312e+010.21%0.00%43.0bp (0.0bp)MF0009.1_TRP(MYB)_class/Jaspar(0.695)
More Information | Similar Motifs Found		motif file (matrix)
20 * A G T C A C T G A C T G A C T G A C G T A C T G A G T C A T G C A C G T A G T C 1e-6-1.511e+010.30%0.02%38.8bp (52.6bp)TCF4/MA0830.3/Jaspar(0.666)
More Information | Similar Motifs Found		motif file (matrix)
21 * A G T C A C T G A C G T A C T G A C T G C G T A A C T G A C G T C G T A A C G T 1e-6-1.426e+010.21%0.01%43.0bp (36.0bp)ZNF354C/MA0130.1/Jaspar(0.706)
More Information | Similar Motifs Found		motif file (matrix)
22 * C G T A A C G T A G T C C G T A A G T C A G T C A C G T A C G T A G C T C G T A A G T C C G T A 1e-3-8.818e+000.17%0.01%43.1bp (40.6bp)Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer(0.719)
More Information | Similar Motifs Found		motif file (matrix)