Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region/call_motif/Mesoderm/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 691
Total background sequences = 89052
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G T C A T C G A A T G C C G T A A C G T G T A C A G C T A C T G A T C G C G T A C G A T A G C T 1e-162-3.743e+0221.42%0.74%52.9bp (65.7bp)ZBTB18/MA0698.2/Jaspar(0.970)
More Information | Similar Motifs Found		motif file (matrix)
2 C G A T C T G A C G T A A G C T G C A T C T G A T C G A G C T A G C A T A T G C G T A C C G T A 1e-72-1.664e+0228.80%6.46%51.4bp (63.0bp)Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer(0.780)
More Information | Similar Motifs Found		motif file (matrix)
3 T G A C G T C A T A G C T G C A A C G T A T C G A C G T A C T G A G C T A G C T A G C T G T A C 1e-56-1.310e+0220.12%3.84%52.7bp (65.5bp)TFAP4/MA1570.1/Jaspar(0.708)
More Information | Similar Motifs Found		motif file (matrix)
4 G A C T C T G A T G C A C G A T A C T G C A T G C T G A T C G A G C T A T G A C 1e-23-5.423e+0119.25%7.35%55.9bp (66.1bp)Nfatc2/MA0152.3/Jaspar(0.900)
More Information | Similar Motifs Found		motif file (matrix)
5 A T G C G A T C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G C A T 1e-21-4.870e+017.53%1.42%49.8bp (70.9bp)TEAD1/MA0090.4/Jaspar(0.959)
More Information | Similar Motifs Found		motif file (matrix)
6 T G C A G C T A G A C T A G C T A C G T A T C G A T C G G T A C 1e-20-4.790e+0114.91%5.19%55.3bp (73.0bp)NFIX/MA0671.2/Jaspar(0.847)
More Information | Similar Motifs Found		motif file (matrix)
7 C T A G G C T A A C G T A C G T A G C T T G C A C A G T C T A G C T A G A T G C 1e-19-4.467e+0113.46%4.58%60.0bp (67.9bp)Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer(0.927)
More Information | Similar Motifs Found		motif file (matrix)
8 T A C G C G A T C T A G A C T G C T A G C A T G A C T G C T A G C T A G C T A G 1e-17-4.044e+0128.80%15.70%51.0bp (83.3bp)ZNF740/MA0753.3/Jaspar(0.882)
More Information | Similar Motifs Found		motif file (matrix)
9 A G T C C A G T A T C G T G A C T C G A A T C G A T G C G A T C C T G A C T A G 1e-17-4.037e+0119.39%8.75%59.6bp (79.0bp)ZBTB6/MA1581.2/Jaspar(0.638)
More Information | Similar Motifs Found		motif file (matrix)
10 C T A G T A C G C T A G C A T G T A G C G C A T A C T G C T A G A T C G T A G C 1e-17-4.001e+0128.22%15.31%57.0bp (85.3bp)KLF10/MA1511.2/Jaspar(0.797)
More Information | Similar Motifs Found		motif file (matrix)
11 C T G A C T A G A C T G A T C G T A C G G T A C A G T C G A T C T A G C G T A C 1e-16-3.757e+018.39%2.27%55.3bp (87.0bp)PLAGL2/MA1548.2/Jaspar(0.794)
More Information | Similar Motifs Found		motif file (matrix)
12 A C T G C G T A A C G T A C T G C G T A A C T G A C G T A C G T T G C A C G T A T A C G A C G T 1e-16-3.687e+011.30%0.01%43.9bp (74.2bp)ZNF652/MA1657.2/Jaspar(0.697)
More Information | Similar Motifs Found		motif file (matrix)
13 T C A G G C T A C A T G G A C T A G C T A T G C C G A T T A C G A T G C G T A C G C T A T C G A 1e-15-3.667e+013.04%0.24%49.2bp (66.9bp)NFIA/MA0670.2/Jaspar(0.700)
More Information | Similar Motifs Found		motif file (matrix)
14 G T C A C G T A G T C A G C A T A G C T A G C T A G T C G A T C G C A T A T G C 1e-15-3.662e+0144.72%29.86%56.4bp (68.5bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.805)
More Information | Similar Motifs Found		motif file (matrix)
15 A G T C C A T G A T G C A G T C G T A C C G T A C T A G G T C A 1e-15-3.655e+0128.22%15.82%55.6bp (78.3bp)ZNF416/MA1979.2/Jaspar(0.894)
More Information | Similar Motifs Found		motif file (matrix)
16 A G T C C G A T C A T G A G T C C G T A C A T G A C T G A T G C G A T C C T G A T A C G T C G A 1e-15-3.583e+0119.83%9.57%52.8bp (75.6bp)Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer(0.729)
More Information | Similar Motifs Found		motif file (matrix)
17 A C T G A G C T A C T G A C G T C T G A C G T A C G T A A C G T T A G C C G T A 1e-13-3.145e+012.89%0.28%45.2bp (56.4bp)Hoxd9(Homeobox)/EB-Hoxd9.HA-ChIP-Seq(GSE142377)/Homer(0.789)
More Information | Similar Motifs Found		motif file (matrix)
18 * A C G T A C T G A T C G C T G A C G A T C G T A A C G T A C T G C G T A C G T A C G T A A G T C 1e-11-2.652e+011.01%0.01%44.5bp (47.8bp)PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer(0.696)
More Information | Similar Motifs Found		motif file (matrix)
19 * A G T C C G T A A T C G G T C A A C G T A C G T A T C G A C G T A C G T A C G T 1e-10-2.524e+012.89%0.39%54.0bp (62.3bp)SRY/MA0084.2/Jaspar(0.786)
More Information | Similar Motifs Found		motif file (matrix)
20 * T A C G T A C G C T G A A T C G A C G T C T G A G C T A C G A T 1e-10-2.433e+0113.60%6.56%56.5bp (70.6bp)RELB/MA1117.2/Jaspar(0.705)
More Information | Similar Motifs Found		motif file (matrix)
21 * C G T A A G C T A T C G C G A T A G T C C T A G C T A G A T G C 1e-10-2.417e+018.68%3.32%54.8bp (70.0bp)YY2/MA0748.3/Jaspar(0.728)
More Information | Similar Motifs Found		motif file (matrix)
22 * A G C T A C G T C G A T C T A G C T G A C G T A C G T A T C A G C T G A A C T G 1e-9-2.172e+018.68%3.54%58.1bp (67.3bp)CHR(?)/Hela-CellCycle-Expression/Homer(0.731)
More Information | Similar Motifs Found		motif file (matrix)
23 * C A G T T A C G A C T G C A T G A T G C A C G T C T A G C G A T A G C T A C G T T C A G A G C T 1e-9-2.153e+018.10%3.19%48.9bp (70.0bp)FOXP3/MA0850.1/Jaspar(0.778)
More Information | Similar Motifs Found		motif file (matrix)
24 * C G T A A C T G A G T C A C G T C G T A A C T G A C T G A G T C C G A T A C T G C G T A A C T G 1e-8-1.986e+010.58%0.00%63.4bp (55.4bp)FEZF2/MA2341.1/Jaspar(0.682)
More Information | Similar Motifs Found		motif file (matrix)
25 * C G T A A C T G A T G C A G T C A C G T A T C G A T C G T C A G C T A G C G A T 1e-8-1.966e+017.09%2.73%54.8bp (79.2bp)ZNF213/MA2121.1/Jaspar(0.773)
More Information | Similar Motifs Found		motif file (matrix)
26 * A C G T C G T A C G T A C G T A C G T A C G T A A C G T C G T A C G T A A C G T A C G T A G T C 1e-8-1.875e+010.72%0.01%61.5bp (39.7bp)Hmga1/MA2124.1/Jaspar(0.773)
More Information | Similar Motifs Found		motif file (matrix)
27 * C A T G C A T G C A T G T A C G C G A T A C T G C A G T A C T G C G A T A C T G C A G T C T A G 1e-6-1.516e+0122.72%15.39%56.9bp (63.5bp)KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer(0.751)
More Information | Similar Motifs Found		motif file (matrix)
28 * A G T C A C G T A C T G A C T G A C T G A C T G A G T C A C G T A G T C A C T G A T C G A C G T 1e-5-1.268e+011.30%0.17%47.6bp (79.8bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.719)
More Information | Similar Motifs Found		motif file (matrix)
29 * A C G T A C T G A G T C A C G T A C T G G T A C A C G T A C T G A G T C A G C T C T G A A T G C 1e-2-4.780e+001.01%0.33%31.0bp (89.0bp)PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer(0.775)
More Information | Similar Motifs Found		motif file (matrix)