Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region/call_motif/Melanocyte_cells/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 719
Total background sequences = 96855
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G A C G T A G T C C G T A A G T C C T A G A C G T A T C G C T G A A G T C G T C A G A T C 1e-115-2.652e+0220.58%1.53%50.2bp (63.1bp)MITF/MA0620.4/Jaspar(0.976)
More Information | Similar Motifs Found
motif file (matrix)
2 C A T G A T G C A G T C G A T C G A C T C T G A T C G A C T A G A T C G T A G C G A T C G C T A 1e-102-2.370e+0237.41%8.28%50.5bp (61.8bp)AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer(0.909)
More Information | Similar Motifs Found
motif file (matrix)
3 A T G C A G T C G C A T A G C T A C G T A C T G A C G T A C G T 1e-66-1.537e+0256.19%25.63%51.8bp (65.3bp)Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer(0.971)
More Information | Similar Motifs Found
motif file (matrix)
4 G C T A G C T A C T G A T C A G T A G C A T G C G A C T A G T C C G A T G C A T C A G T A T C G 1e-46-1.073e+0251.74%26.37%50.0bp (64.6bp)Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer(0.655)
More Information | Similar Motifs Found
motif file (matrix)
5 C T G A A C G T A C T G G T C A A G T C A C G T G T A C G T C A 1e-23-5.511e+0117.52%6.37%51.4bp (65.2bp)FOSL1::JUND/MA1142.2/Jaspar(0.949)
More Information | Similar Motifs Found
motif file (matrix)
6 C G A T T A C G A G T C G A T C G A T C G C A T T A C G C G T A C T A G C T A G A T C G A G T C 1e-23-5.394e+0122.11%9.43%53.8bp (61.4bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.745)
More Information | Similar Motifs Found
motif file (matrix)
7 C T G A A G T C C G A T A C G T A G T C A T G C A C G T T A C G 1e-22-5.207e+0128.65%14.29%52.9bp (62.6bp)Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.933)
More Information | Similar Motifs Found
motif file (matrix)
8 A G T C C G T A A C T G A C T G C T G A C G T A A G T C A G T C C G T A A C G T C G T A A G T C 1e-21-4.988e+011.11%0.00%39.1bp (0.0bp)ETV2::HOXB13/MA1943.2/Jaspar(0.627)
More Information | Similar Motifs Found
motif file (matrix)
9 C T A G C A T G A G T C G A C T C T G A G A C T A C G T A C G T 1e-18-4.344e+0118.08%7.70%53.6bp (64.2bp)Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer(0.806)
More Information | Similar Motifs Found
motif file (matrix)
10 C G T A A G C T C G T A C G T A A C T G G T A C A T G C C G T A A C T G C G A T T A C G A C G T 1e-18-4.215e+017.93%1.90%54.4bp (59.5bp)PB0195.1_Zbtb3_2/Jaspar(0.637)
More Information | Similar Motifs Found
motif file (matrix)
11 C G T A C G T A A G T C A C G T A C T G A C G T C G T A A C T G C G T A A C G T A G T C C G T A 1e-15-3.603e+010.83%0.00%51.9bp (60.5bp)ZBTB32/MA1580.1/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
12 C G T A A C T G A C G T C G T A A C G T A G T C A C G T A C G T A C T G A C T G A G T C A C G T 1e-15-3.603e+010.83%0.00%12.5bp (0.0bp)ZNF416/MA1979.2/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
13 A C G T C G T A A C G T A C T G A C G T A C T G A G T C A G T C A C G T A G T C A C G T C G T A 1e-15-3.603e+010.83%0.00%12.5bp (47.0bp)PB0208.1_Zscan4_2/Jaspar(0.698)
More Information | Similar Motifs Found
motif file (matrix)
14 A C G T G T C A A C G T A C G T A C G T A C G T A C G T A G T C A C T G C G T A A C G T A G T C 1e-15-3.603e+010.83%0.00%13.2bp (0.0bp)MEF2A/MA0052.5/Jaspar(0.688)
More Information | Similar Motifs Found
motif file (matrix)
15 C G T A A G T C A G T C C G T A A C G T A C G T C G A T A G T C A G T C C G T A A G T C A C G T 1e-15-3.521e+010.97%0.00%29.4bp (38.3bp)Nfatc1/MA0624.3/Jaspar(0.694)
More Information | Similar Motifs Found
motif file (matrix)
16 C G A T C G A T C T G A C T G A C A G T C G T A T A C G T C G A G T A C C G A T 1e-14-3.338e+014.87%0.91%48.7bp (63.0bp)SATB1/MA1963.2/Jaspar(0.673)
More Information | Similar Motifs Found
motif file (matrix)
17 G T A C A G T C A C T G A C G T C G A T C T G A C G A T A T C G C G A T G T A C 1e-13-3.107e+012.64%0.24%50.1bp (61.5bp)OVOL1/MA1544.2/Jaspar(0.722)
More Information | Similar Motifs Found
motif file (matrix)
18 C G T A A C T G C G T A A G T C A C G T A G T C A G T C C G T A C G T A C G T A A C T G A C T G 1e-12-2.945e+010.83%0.00%23.0bp (0.0bp)TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer(0.732)
More Information | Similar Motifs Found
motif file (matrix)
19 A C G T C G T A C T G A A C G T A C G T C G T A G T A C A T G C C G T A C G T A C G T A A G T C 1e-12-2.945e+010.83%0.00%40.8bp (38.2bp)PH0053.1_Hoxa6/Jaspar(0.767)
More Information | Similar Motifs Found
motif file (matrix)
20 C G T A A C T G A G T C C G T A A C T G A G T C A C G T C G T A C G T A C G T A A C T G A G T C 1e-12-2.932e+010.70%0.00%14.4bp (3.5bp)PH0041.1_Hmx1/Jaspar(0.591)
More Information | Similar Motifs Found
motif file (matrix)
21 A C T G A G T C C G T A A C G T A C G T A C G T A G T C C G T A A C G T A G T C C G T A A G T C 1e-12-2.932e+010.70%0.00%14.4bp (0.0bp)ATF4/MA0833.3/Jaspar(0.749)
More Information | Similar Motifs Found
motif file (matrix)
22 A G T C C G T A A C G T A G T C C G T A A C T G C G T A A C G T C G T A C G T A A G T C A C T G 1e-12-2.932e+010.70%0.00%14.4bp (0.0bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.718)
More Information | Similar Motifs Found
motif file (matrix)
23 A C T G A C T G C G T A C G T A C G T A A C T G A C G T C G T A C G T A C G T A C G T A A G T C 1e-12-2.932e+010.70%0.00%14.4bp (0.0bp)IRF2/MA0051.2/Jaspar(0.764)
More Information | Similar Motifs Found
motif file (matrix)
24 * A G C T G T A C A C T G C T A G A C G T A G T C C G T A A G T C 1e-11-2.691e+013.62%0.62%42.3bp (63.2bp)NR2C1/MA1535.2/Jaspar(0.737)
More Information | Similar Motifs Found
motif file (matrix)
25 * G T A C A G C T A G T C A C T G A C G T A T C G C T G A C G A T 1e-9-2.295e+014.31%1.06%57.0bp (62.9bp)Npas4(bHLH)/Neuron-Npas4-ChIP-Seq(GSE127793)/Homer(0.814)
More Information | Similar Motifs Found
motif file (matrix)
26 * C G A T A C G T C T G A C G T A A G C T A G T C A G C T A G T C A T C G G A T C 1e-9-2.291e+013.06%0.53%52.4bp (60.9bp)GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer(0.740)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C G T A G C T A C G T A G T C G T A C A T C G A T C G G C A T A G C T A C G T 1e-9-2.254e+013.76%0.82%54.3bp (62.6bp)ERF::FOXI1/MA1935.2/Jaspar(0.837)
More Information | Similar Motifs Found
motif file (matrix)
28 * A G T C C G T A C G T A A G T C A C T G A C T G A C T G A C T G A C G T A C T G 1e-8-2.004e+010.56%0.00%13.8bp (6.1bp)ZIC4/MA0751.2/Jaspar(0.693)
More Information | Similar Motifs Found
motif file (matrix)
29 * A G T C A C G T C G T A A C T G C G T A A C G T C G T A A C G T A C T G A C G T 1e-8-1.973e+010.97%0.03%48.0bp (45.5bp)GATA2/MA0036.4/Jaspar(0.674)
More Information | Similar Motifs Found
motif file (matrix)
30 * A C T G C G T A C G T A A C G T A C G T C G T A C G T A G T C A A C G T A C G T 1e-8-1.886e+011.95%0.25%26.5bp (62.0bp)PROP1/MA0715.1/Jaspar(0.784)
More Information | Similar Motifs Found
motif file (matrix)
31 * A C T G A C T G A G T C A T G C A C G T A C G T A C G T A C G T A G T C A C T G 1e-8-1.847e+010.83%0.02%18.0bp (37.0bp)NR4A2/MA0160.3/Jaspar(0.653)
More Information | Similar Motifs Found
motif file (matrix)
32 * A G T C C G T A A T C G G T C A A C T G C G T A A C T G A G T C 1e-7-1.825e+0112.66%6.79%59.1bp (60.7bp)ZNF768/MA1731.2/Jaspar(0.851)
More Information | Similar Motifs Found
motif file (matrix)
33 * A G T C C G T A A G T C G A C T A C T G A C G T A C G T A C G T 1e-7-1.731e+0118.22%11.29%59.9bp (63.0bp)BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer(0.719)
More Information | Similar Motifs Found
motif file (matrix)