Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region/call_motif/Kidney/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1641
Total background sequences = 95263
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C A G A G C T G A C T T C G A G T C A G A C T T A G C C T G A C A G T A G C T C G T A T C G A 1e-808-1.862e+0346.25%1.99%47.4bp (70.8bp)HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer(0.972)
More Information | Similar Motifs Found		motif file (matrix)
2 A G C T T C G A C T A G A C G T A C G T T C G A G T C A G T A C 1e-155-3.573e+0270.32%37.90%54.0bp (68.0bp)PB0081.1_Tcf1_1/Jaspar(0.859)
More Information | Similar Motifs Found		motif file (matrix)
3 G A T C G T A C G C T A A G C T T C G A T C G A G T C A G C A T G A T C G C T A A T G C G T A C 1e-60-1.385e+0210.79%2.39%51.4bp (67.3bp)Hoxc10(Homeobox)/EB-Hoxc10.iFlag-ChIP-Seq(GSE142377)/Homer(0.912)
More Information | Similar Motifs Found		motif file (matrix)
4 G C A T C G A T G C A T C T A G T G C A G T A C G T A C C G T A A C T G A T G C 1e-59-1.378e+0243.69%25.06%55.4bp (66.4bp)ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer(0.748)
More Information | Similar Motifs Found		motif file (matrix)
5 C G T A T C G A A C G T C T A G C T G A C T G A A T C G A G T C C T A G C G A T A C T G G C A T 1e-27-6.372e+012.13%0.15%58.1bp (52.7bp)PAX2/MA0067.3/Jaspar(0.732)
More Information | Similar Motifs Found		motif file (matrix)
6 G T C A T G C A G C A T A C G T A T C G T A G C A G T C G C A T A C T G T A C G 1e-26-6.030e+0116.03%7.98%54.7bp (67.4bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.759)
More Information | Similar Motifs Found		motif file (matrix)
7 G T A C C G T A G T A C C G T A A C G T A C G T A T G C A G T C C G T A C T G A A C T G G T C A 1e-24-5.744e+011.34%0.04%53.1bp (58.5bp)TEAD4/MA0809.3/Jaspar(0.828)
More Information | Similar Motifs Found		motif file (matrix)
8 C G T A A G T C A C G T C G T A G T C A A C T G A C G T A C G T C G T A A C G T A G C T C G T A 1e-21-5.016e+010.67%0.00%48.2bp (30.2bp)SATB1/MA1963.2/Jaspar(0.663)
More Information | Similar Motifs Found		motif file (matrix)
9 T G C A A G T C C G T A C G A T C G A T C T G A T G C A A G T C G A C T A T G C 1e-19-4.543e+014.81%1.40%58.7bp (66.4bp)ZNF652/MA1657.2/Jaspar(0.631)
More Information | Similar Motifs Found		motif file (matrix)
10 A T G C A C G T A C T G C G T A A C T G A C G T C G T A A C T G A T C G C G T A C T G A C G T A 1e-18-4.194e+010.61%0.00%33.4bp (43.3bp)PB0114.1_Egr1_2/Jaspar(0.632)
More Information | Similar Motifs Found		motif file (matrix)
11 A C G T A C G T A C G T C G A T A C G T G T C A A C G T A C T G C G T A A G T C A G T C A G C T 1e-17-4.139e+011.04%0.04%39.8bp (46.7bp)PH0012.1_Cdx1/Jaspar(0.831)
More Information | Similar Motifs Found		motif file (matrix)
12 C G T A A T C G A G C T A G T C G C T A G A T C A T C G A T G C 1e-15-3.458e+0134.98%26.07%53.4bp (65.5bp)PAX5/MA0014.4/Jaspar(0.860)
More Information | Similar Motifs Found		motif file (matrix)
13 A C G T C G A T A C G T A G T C A C G T C T A G A C T G A G T C A G T C C G T A A G T C A C G T 1e-14-3.419e+010.67%0.01%52.1bp (74.4bp)Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer(0.703)
More Information | Similar Motifs Found		motif file (matrix)
14 A G T C A G T C A C G T A C T G A T C G A G T C C G T A A T C G A G T C A C G T A C G T A C G T 1e-12-2.956e+010.61%0.02%53.9bp (63.6bp)ZNF7(Zf)/HepG2-ZNF7.Flag-ChIP-Seq(Encode)/Homer(0.650)
More Information | Similar Motifs Found		motif file (matrix)
15 C G T A C T G A C T A G A C G T A C G T G C T A C G T A C G T A T A G C C G A T A C G T A T G C 1e-12-2.870e+010.79%0.04%52.5bp (77.2bp)NR6A1/MA1541.2/Jaspar(0.660)
More Information | Similar Motifs Found		motif file (matrix)
16 C A T G T G A C G C A T A C T G A T C G C G T A T G C A C T G A 1e-12-2.815e+0117.79%11.76%54.7bp (63.8bp)Nfatc1/MA0624.3/Jaspar(0.739)
More Information | Similar Motifs Found		motif file (matrix)
17 A C G T A C G T C G T A C T G A A T C G C G T A A C T G G T C A A C T G A C G T A G T C C G T A 1e-12-2.807e+010.67%0.02%47.0bp (73.1bp)Rhox11/MA0629.2/Jaspar(0.589)
More Information | Similar Motifs Found		motif file (matrix)
18 A C T G A G T C C T G A C T A G A G T C A G C T A T C G T G A C A G T C A G T C 1e-12-2.801e+016.52%3.05%56.6bp (68.5bp)ZNF549/MA1728.2/Jaspar(0.746)
More Information | Similar Motifs Found		motif file (matrix)
19 G A C T A G C T T A G C G T A C T G A C C G T A C T A G A T C G T C G A C T G A 1e-12-2.776e+013.35%1.09%62.5bp (63.7bp)Stat6/MA0520.2/Jaspar(0.894)
More Information | Similar Motifs Found		motif file (matrix)
20 * A C T G A C T G C G T A C G T A C T G A C G T A A C T G A C T G A C G T C G T A C G T A A C G T 1e-11-2.682e+010.37%0.00%41.6bp (39.0bp)Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer(0.714)
More Information | Similar Motifs Found		motif file (matrix)
21 * A T C G C G T A T A G C G T C A G A C T A C G T A C G T A G T C G A C T C G T A A C T G G C A T 1e-11-2.664e+010.73%0.04%34.4bp (48.8bp)Nfatc2/MA0152.3/Jaspar(0.666)
More Information | Similar Motifs Found		motif file (matrix)
22 * C T A G T G A C G T C A C A T G T A C G C T A G G C T A A T C G 1e-11-2.597e+0116.88%11.22%57.4bp (66.6bp)SP5/MA1965.2/Jaspar(0.728)
More Information | Similar Motifs Found		motif file (matrix)
23 * C G A T A C G T A G T C A G T C T A G C G T C A T A G C G C T A T A C G A C T G 1e-10-2.513e+016.22%2.99%56.0bp (65.2bp)RBPJ/MA1116.2/Jaspar(0.764)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C G T A C G T A C G T A T C G A G T C C G T A A C G T C G T A A T C G C G T A A C G T C G T A 1e-10-2.466e+010.55%0.02%49.9bp (55.7bp)Oct11(POU,Homeobox)/NCIH1048-POU2F3-ChIP-seq(GSE115123)/Homer(0.766)
More Information | Similar Motifs Found		motif file (matrix)
25 * C T G A A T C G T C A G A T G C C G T A A T C G A G T C T A G C C G A T A T C G 1e-9-2.214e+013.72%1.49%49.9bp (68.6bp)ZNF91(Zf)/HEK-ZNF91.HA-ChIP-Seq(GSE162571)/Homer(0.676)
More Information | Similar Motifs Found		motif file (matrix)
26 * A G T C A C G T A C G T A G T C A C G T A C T G A C G T A G T C A G T C A C G T 1e-7-1.749e+010.85%0.12%40.3bp (62.6bp)OSR2/MA1646.2/Jaspar(0.769)
More Information | Similar Motifs Found		motif file (matrix)
27 * A G C T A T C G C T A G A G T C C G A T A T G C C A T G A G T C A C G T A T G C 1e-4-9.928e+005.24%3.35%56.2bp (52.1bp)Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer(0.605)
More Information | Similar Motifs Found		motif file (matrix)
28 * G T A C C T A G C G T A C G T A A G T C C T A G C G T A C G T A A G T C C T A G 1e-3-8.833e+000.30%0.03%39.9bp (59.0bp)T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer(0.595)
More Information | Similar Motifs Found		motif file (matrix)