Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region/call_motif/Glomerular_endothelial_cells/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 161
Total background sequences = 97624
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 G C A T A C T G A C G T A C G T A C G T C G T A A G C T T C G A 1e-64-1.494e+0254.04%5.42%45.7bp (60.9bp)Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer(0.973)
More Information | Similar Motifs Found		motif file (matrix)
2 T A G C C G T A A C T G A C T G C G T A C G T A C T A G A G C T 1e-55-1.270e+0277.64%19.86%49.3bp (65.2bp)ELF3/MA0640.3/Jaspar(0.975)
More Information | Similar Motifs Found		motif file (matrix)
3 G T C A A T G C A G T C C T G A A C G T A G C T A T C G A C G T 1e-26-6.074e+0134.16%5.97%54.9bp (62.3bp)Sox3/MA0514.3/Jaspar(0.951)
More Information | Similar Motifs Found		motif file (matrix)
4 * C T G A G A C T C G A T C T G A G C T A T C G A G T A C G C T A T A G C C G T A 1e-10-2.428e+0124.84%7.72%50.6bp (59.1bp)Arid3a/MA0151.1/Jaspar(0.691)
More Information | Similar Motifs Found		motif file (matrix)
5 * G T C A A C G T T A C G A T G C A G C T A C G T A C T G C G T A C G A T C T A G C G T A A T C G 1e-10-2.387e+014.35%0.07%55.8bp (67.7bp)HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer(0.686)
More Information | Similar Motifs Found		motif file (matrix)
6 * C T G A A C T G G T A C A C T G A C T G G T C A C T G A C T G A 1e-9-2.279e+0116.77%3.83%55.5bp (63.1bp)Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer(0.821)
More Information | Similar Motifs Found		motif file (matrix)
7 * G C A T G A T C A G C T C A G T C T A G A T G C G T A C G T C A T C G A T A C G 1e-9-2.221e+0117.39%4.23%53.9bp (62.1bp)NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer(0.860)
More Information | Similar Motifs Found		motif file (matrix)
8 * A C T G C T A G G T C A G T C A C G T A A C T G A C T G T C A G A C G T A C T G 1e-9-2.173e+017.45%0.60%52.7bp (64.0bp)EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer(0.620)
More Information | Similar Motifs Found		motif file (matrix)
9 * A G C T A C G T A G C T A C G T C T A G A C T G C G T A A C G T T A G C C G T A 1e-9-2.121e+016.83%0.49%46.9bp (61.9bp)RHOXF1/MA0719.2/Jaspar(0.700)
More Information | Similar Motifs Found		motif file (matrix)
10 * A C T G C T A G A G T C A C G T A C T G C T A G T A G C G C A T T C A G A G T C T G C A A C T G 1e-8-1.986e+016.21%0.42%46.6bp (62.8bp)FEZF2/MA2341.1/Jaspar(0.653)
More Information | Similar Motifs Found		motif file (matrix)
11 * C G T A C G T A A T C G A C G T C T G A C G A T C G T A A G T C G T C A C T A G 1e-8-1.896e+017.45%0.77%36.4bp (58.5bp)FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.691)
More Information | Similar Motifs Found		motif file (matrix)
12 * G A C T A G T C A C G T A C G T G T A C A G T C C G T A A C T G A C G T C G T A C G T A A C T G 1e-6-1.527e+013.11%0.08%74.7bp (58.6bp)Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer(0.757)
More Information | Similar Motifs Found		motif file (matrix)
13 * A C T G A C T G A C T G A C G T A C T G A C T G A C T G A C T G A T C G A C G T A C T G C T A G 1e-5-1.189e+014.35%0.43%65.8bp (56.8bp)KLF4/MA0039.5/Jaspar(0.817)
More Information | Similar Motifs Found		motif file (matrix)
14 * A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C A C G T A G T C 1e0-3.255e-010.62%0.79%15.0bp (44.4bp)PRDM1/MA0508.4/Jaspar(0.622)
More Information | Similar Motifs Found		motif file (matrix)