Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region/call_motif/Endothelium/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 839
Total background sequences = 84693
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A G T C T C G A A G C T C G A T A G C T G T A C A G T C C G A T A T C G A G C T 1e-269-6.216e+0273.54%17.97%51.1bp (80.4bp)ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer(0.974)
More Information | Similar Motifs Found		motif file (matrix)
2 C T G A T C G A C G T A G T A C G C T A C G T A G A C T T C A G T C A G A G T C 1e-67-1.556e+0220.62%4.13%53.2bp (67.3bp)Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer(0.969)
More Information | Similar Motifs Found		motif file (matrix)
3 T A C G A C G T G T C A C T G A G T C A A G C T T C G A C A T G 1e-43-1.001e+0223.96%8.11%61.9bp (75.1bp)Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer(0.824)
More Information | Similar Motifs Found		motif file (matrix)
4 A T C G A C T G A T C G C G A T A C T G A C T G C T A G C T A G 1e-20-4.736e+0133.85%19.93%53.0bp (91.7bp)KLF4/MA0039.5/Jaspar(0.995)
More Information | Similar Motifs Found		motif file (matrix)
5 A G T C C A G T A C T G A T C G A T G C G T A C C G T A T C A G T C A G C T A G 1e-19-4.434e+0143.98%29.13%55.9bp (89.0bp)Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer(0.712)
More Information | Similar Motifs Found		motif file (matrix)
6 T A C G A C G T C T A G C G T A T A G C G A C T A G T C C G T A 1e-18-4.236e+0113.95%5.63%55.9bp (76.4bp)BNC2/MA1928.2/Jaspar(0.973)
More Information | Similar Motifs Found		motif file (matrix)
7 A C T G A C T G C T G A C G T A C T A G C A G T A C G T C A G T T C G A G C A T C G A T A C G T 1e-18-4.175e+013.10%0.28%55.3bp (69.8bp)FOXD3/MA0041.3/Jaspar(0.691)
More Information | Similar Motifs Found		motif file (matrix)
8 C G T A C T G A A C G T A C T G C G T A T G A C T A C G C A G T G T A C G C T A 1e-17-3.938e+0112.51%4.94%56.3bp (70.2bp)JDP2/MA0656.2/Jaspar(0.935)
More Information | Similar Motifs Found		motif file (matrix)
9 C A T G A G C T A G C T T G C A C G A T C A G T C G A T C G A T C A G T C T G A 1e-15-3.611e+0110.25%3.78%50.9bp (59.1bp)MEF2A/MA0052.5/Jaspar(0.883)
More Information | Similar Motifs Found		motif file (matrix)
10 A C G T A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A G T C C G T A A T G C 1e-12-2.847e+010.95%0.01%49.6bp (67.9bp)FOXS1/MA2118.1/Jaspar(0.836)
More Information | Similar Motifs Found		motif file (matrix)
11 * A T G C C G T A A C T G G T A C G C A T C T A G T A C G A T G C 1e-11-2.597e+0122.17%13.49%57.6bp (87.9bp)Twist2/MA0633.3/Jaspar(0.906)
More Information | Similar Motifs Found		motif file (matrix)
12 * C T A G A G T C C G A T A C T G A C G T A G C T C A G T C A T G A C G T C G A T 1e-10-2.357e+019.18%4.06%57.0bp (74.0bp)MF0005.1_Forkhead_class/Jaspar(0.747)
More Information | Similar Motifs Found		motif file (matrix)
13 * C A T G C T A G A T C G A G T C A C G T C A T G A T C G T G A C C G A T C T A G A G T C A G T C 1e-10-2.308e+012.38%0.36%53.3bp (103.8bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.757)
More Information | Similar Motifs Found		motif file (matrix)
14 * A G T C C G T A A C T G A T G C G T C A C G T A C G T A C G T A C A G T C G A T 1e-8-1.953e+012.74%0.60%54.3bp (79.9bp)MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer(0.668)
More Information | Similar Motifs Found		motif file (matrix)
15 * A C G T A G C T A G C T C T A G C T A G A T C G A G T C G T A C A G T C A G T C 1e-6-1.513e+018.34%4.35%58.2bp (84.4bp)PLAGL2/MA1548.2/Jaspar(0.730)
More Information | Similar Motifs Found		motif file (matrix)
16 * C T A G C G T A G T C A C G A T C T A G A C T G G T A C A C G T A C G T A C G T 1e-3-7.766e+003.58%1.81%51.3bp (72.7bp)POL004.1_CCAAT-box/Jaspar(0.608)
More Information | Similar Motifs Found		motif file (matrix)
17 * C G T A A T G C C T G A T A C G C T G A A T C G C G T A T A G C G T C A A T G C G C T A A T C G 1e-2-6.770e+001.31%0.43%39.8bp (61.5bp)ZNF768/MA1731.2/Jaspar(0.675)
More Information | Similar Motifs Found		motif file (matrix)
18 * A C G T A C T G A T G C C T A G A C G T A C T G G T A C A C T G A C G T A C T G A T G C A C T G 1e-2-4.879e+000.24%0.02%21.6bp (45.6bp)PB0130.1_Gm397_2/Jaspar(0.728)
More Information | Similar Motifs Found		motif file (matrix)