Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region/call_motif/Endocardial_cells/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1459
Total background sequences = 94678
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G A C G T A C G T C A G T C G A T A G C T A G T C A G C T C G A T C T A G C T A G T G A C 1e-888-2.045e+0338.31%0.46%44.8bp (67.3bp)NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer(0.888)
More Information | Similar Motifs Found		motif file (matrix)
2 G A C T A C T G A G C T A G C T A C G T C G T A G C A T G T A C 1e-130-3.004e+0252.98%23.40%52.8bp (63.6bp)Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer(0.879)
More Information | Similar Motifs Found		motif file (matrix)
3 C T A G G A C T A G C T A G C T G T A C G T A C C G A T C A T G 1e-88-2.047e+0259.84%34.07%54.3bp (68.9bp)EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer(0.909)
More Information | Similar Motifs Found		motif file (matrix)
4 A T G C T G A C A G T C A G C T C T A G A C G T A C G T C G A T 1e-88-2.030e+0263.74%37.86%54.1bp (70.3bp)Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer(0.856)
More Information | Similar Motifs Found		motif file (matrix)
5 A C T G G A T C G A C T G A C T C G T A C G A T C A G T A C T G G A C T G A C T 1e-24-5.727e+0112.89%5.61%58.6bp (63.7bp)PB0183.1_Sry_2/Jaspar(0.833)
More Information | Similar Motifs Found		motif file (matrix)
6 A C T G A C T G A C G T A C G T A C T G A C G T C G T A C G T A C G T A A C T G A C G T C G T A 1e-20-4.825e+010.75%0.01%60.4bp (63.3bp)ZBTB32/MA1580.1/Jaspar(0.680)
More Information | Similar Motifs Found		motif file (matrix)
7 T A G C G C A T A C T G C G A T C T A G A C T G C T G A T C G A C T G A C T A G C G A T T C G A 1e-20-4.818e+014.80%1.20%51.1bp (63.0bp)Nfatc1/MA0624.3/Jaspar(0.762)
More Information | Similar Motifs Found		motif file (matrix)
8 C G A T A G T C C G T A A G T C A C G T A G T C G T A C G T A C A G T C G T C A A T C G A C G T 1e-20-4.693e+010.96%0.02%33.1bp (63.0bp)RELB/MA1117.2/Jaspar(0.723)
More Information | Similar Motifs Found		motif file (matrix)
9 A C G T A G C T A C T G A C T G T G A C G T C A C G T A C G T A A C G T C G A T 1e-19-4.407e+015.14%1.47%62.7bp (68.5bp)NFIA/MA0670.2/Jaspar(0.771)
More Information | Similar Motifs Found		motif file (matrix)
10 A C T G A C G T A C G T A C T G A C T G C G T A A C T G A C T G C G T A A C T G C G T A A C T G 1e-17-4.054e+010.62%0.00%63.8bp (30.1bp)ZKSCAN5/MA1652.2/Jaspar(0.695)
More Information | Similar Motifs Found		motif file (matrix)
11 A C G T T A C G G A T C G A T C G C A T A T C G T G A C T A G C G C A T A G C T G T A C G T A C 1e-16-3.844e+010.96%0.03%53.6bp (63.0bp)Zfp335/MA2002.2/Jaspar(0.663)
More Information | Similar Motifs Found		motif file (matrix)
12 G T C A G C T A G A T C A G T C G T C A T A C G G T C A A T C G G T C A C A T G 1e-14-3.440e+014.39%1.35%61.5bp (64.6bp)ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer(0.784)
More Information | Similar Motifs Found		motif file (matrix)
13 A G T C A C G T A G T C A C G T A C G T A G T C C G T A A C T G A C T G A G T C A G T C C G T A 1e-13-3.164e+010.41%0.00%62.3bp (1.3bp)Zfp335/MA2002.2/Jaspar(0.610)
More Information | Similar Motifs Found		motif file (matrix)
14 C G T A A C G T C G T A C G T A C G T A A C G T A C T G A C T G A C G T A C G T C G T A C G T A 1e-12-2.810e+010.48%0.01%40.7bp (53.8bp)ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer(0.768)
More Information | Similar Motifs Found		motif file (matrix)
15 * A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T C G T A A G T C 1e-11-2.700e+010.82%0.04%21.5bp (54.6bp)NR1I3/MA1534.2/Jaspar(0.669)
More Information | Similar Motifs Found		motif file (matrix)
16 * C G T A C A T G A G T C C G T A A C T G C T A G T G A C G T A C G C A T T G C A 1e-11-2.698e+012.06%0.41%50.0bp (68.2bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.790)
More Information | Similar Motifs Found		motif file (matrix)
17 * C T A G C G T A C G T A C G T A A C T G C T G A C T A G G T A C A C T G G T A C 1e-11-2.629e+012.40%0.57%41.5bp (66.6bp)PRDM1/MA0508.4/Jaspar(0.625)
More Information | Similar Motifs Found		motif file (matrix)
18 * A G T C C G T A C G T A A C G T A G C T A G T C A G T C A C G T A G T C C G T A A C T G A G T C 1e-10-2.423e+010.48%0.01%76.4bp (39.6bp)PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer(0.687)
More Information | Similar Motifs Found		motif file (matrix)
19 * A C T G C G T A A C T G C G T A C G T A A C T G C G T A C G T A A G T C A C G T 1e-9-2.228e+011.23%0.17%52.7bp (71.0bp)ZNF677/MA2101.1/Jaspar(0.692)
More Information | Similar Motifs Found		motif file (matrix)
20 * A G T C C G T A C G T A A G T C A C G T A C T G A G T C A C T G A G T C A G T C 1e-9-2.222e+010.34%0.00%31.4bp (29.7bp)MYB/MA0100.4/Jaspar(0.774)
More Information | Similar Motifs Found		motif file (matrix)
21 * C G T A A G T C C G T A A G T C C G T A C G T A A G T C C G T A C G T A A G T C A C G T A C T G 1e-9-2.222e+010.34%0.00%28.8bp (16.2bp)MYB/MA0100.4/Jaspar(0.706)
More Information | Similar Motifs Found		motif file (matrix)
22 * C G T A A C G T C T G A C G T A C G T A C T A G C G T A A C T G A G T C C G T A A C T G A C G T 1e-9-2.102e+010.69%0.04%45.3bp (71.1bp)ZNF677/MA2101.1/Jaspar(0.635)
More Information | Similar Motifs Found		motif file (matrix)
23 * A G T C C G T A A C G T A C T G C G A T A C G T A C T G C G T A C G T A C G T A C G T A C G T A 1e-9-2.096e+010.41%0.01%29.0bp (42.6bp)CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer(0.669)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C G T A C T G C G T A A T G C A C G T A G T C C G T A A C T G 1e-7-1.762e+015.62%2.90%57.3bp (64.5bp)BNC2/MA1928.2/Jaspar(0.978)
More Information | Similar Motifs Found		motif file (matrix)
25 * A G T C C G T A A G T C A C G T A G T C A G T C A C G T A C T G A G T C A G T C 1e-7-1.680e+010.82%0.10%15.7bp (69.6bp)ASCL1/MA1631.2/Jaspar(0.688)
More Information | Similar Motifs Found		motif file (matrix)
26 * A G T C A G T C A C G T A C G T A C G T A C T G C G T A A C G T A C G T A C G T 1e-5-1.362e+010.69%0.09%69.5bp (54.9bp)Lef1/MA0768.3/Jaspar(0.877)
More Information | Similar Motifs Found		motif file (matrix)
27 * A C T G A C G T C A G T A C G T A G C T T A G C C T G A C A G T A C T G C T A G 1e-5-1.274e+011.51%0.47%60.2bp (62.3bp)X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.758)
More Information | Similar Motifs Found		motif file (matrix)
28 * A T G C A C G T C G T A A C G T C G T A A G T C A C G T A C G T 1e-4-1.072e+011.71%0.66%69.2bp (59.2bp)SD0003.1_at_AC_acceptor/Jaspar(0.650)
More Information | Similar Motifs Found		motif file (matrix)