Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region/call_motif/Cardiomyocytes/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 2487
Total background sequences = 90507
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C A T G A G T C A G C T G T C A C G T A C G T A C G T A C G T A G C A T C T G A C A T G G T A C 1e-1775-4.088e+0359.67%2.09%47.2bp (61.5bp)Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer(0.980)
More Information | Similar Motifs Found		motif file (matrix)
2 A C T G A C T G A G T C C G T A C G T A A C T G A C G T A C T G A G T C A G T C C G T A G T A C 1e-265-6.108e+023.46%0.00%28.9bp (30.3bp)HES7/MA0822.1/Jaspar(0.802)
More Information | Similar Motifs Found		motif file (matrix)
3 A C G T A C G T A C G T A G T C C G T A A C T G A C G T A G T C C G T A A C T G A C T G A G T C 1e-261-6.027e+023.42%0.00%20.5bp (0.0bp)Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer(0.662)
More Information | Similar Motifs Found		motif file (matrix)
4 A G T C A G T C C G T A C G T A G T A C C G T A A C G T C G T A A C T G G A C T A G T C A C T G 1e-258-5.947e+023.38%0.00%22.8bp (0.0bp)Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer(0.597)
More Information | Similar Motifs Found		motif file (matrix)
5 A C G T A C T G A C T G A C T G C G T A A C G T A C T G A C T G C G T A C G T A A C G T A C G T 1e-236-5.438e+023.42%0.00%39.6bp (51.0bp)PB0098.1_Zfp410_1/Jaspar(0.749)
More Information | Similar Motifs Found		motif file (matrix)
6 C G T A A G T C A G T C C G T A A G T C C G T A A C G T C G T A A C G T A G T C A G T C C G T A 1e-226-5.226e+023.02%0.00%45.2bp (40.1bp)RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer(0.695)
More Information | Similar Motifs Found		motif file (matrix)
7 A G T C C G T A C G T A C G T A A G T C A G T C A C G T A G T C A C G T A C T G A C T G C G T A 1e-210-4.852e+023.10%0.00%35.1bp (39.9bp)ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer(0.734)
More Information | Similar Motifs Found		motif file (matrix)
8 G C A T G A C T C T A G C G T A A T G C G A C T A G T C C G T A G C T A C T A G T A C G A T C G 1e-192-4.436e+023.46%0.01%34.2bp (54.2bp)BACH2/MA1101.3/Jaspar(0.826)
More Information | Similar Motifs Found		motif file (matrix)
9 C T G A A C G T A C G T A C T G C G T A A G T C C G T A C T A G A C T G A C G T A C G T A C G T 1e-185-4.273e+022.77%0.00%43.4bp (42.2bp)PH0104.1_Meis2/Jaspar(0.812)
More Information | Similar Motifs Found		motif file (matrix)
10 A C T G A C T G A G T C C G T A C G T A A C G T C G T A A G T C A G T C A G T C 1e-182-4.202e+023.38%0.01%24.0bp (77.7bp)MF0003.1_REL_class/Jaspar(0.742)
More Information | Similar Motifs Found		motif file (matrix)
11 C G T A A C T G C G T A A G T C A C G T A T C G A G C T A C G T C G T A C G A T C G T A G T C A 1e-179-4.127e+022.45%0.00%56.3bp (44.1bp)MYNN(Zf)/HEK293-MYNN.eGFP-ChIP-Seq(Encode)/Homer(0.671)
More Information | Similar Motifs Found		motif file (matrix)
12 A C T G C G T A C G T A A C G T A C G T C G T A A C T G A G T C A C G T C G T A 1e-153-3.529e+023.42%0.02%35.7bp (54.6bp)PAX4/MA0068.2/Jaspar(0.695)
More Information | Similar Motifs Found		motif file (matrix)
13 A G T C A G C T A C G T G A C T C G T A G T C A C T G A A C T G C G T A C T G A A G T C A T C G 1e-152-3.514e+022.13%0.00%26.9bp (40.7bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.668)
More Information | Similar Motifs Found		motif file (matrix)
14 A C T G A C T G A G T C C G T A A C T G C G T A A C T G A G T C C G T A A C T G A C T G A G T C 1e-137-3.168e+023.34%0.03%46.0bp (68.9bp)Zic2/MA1629.2/Jaspar(0.710)
More Information | Similar Motifs Found		motif file (matrix)
15 A C G T A G T C A C T G C G T A A G T C A C G T C G T A A C G T 1e-120-2.774e+023.46%0.05%23.5bp (59.4bp)CUX1/MA0754.3/Jaspar(0.666)
More Information | Similar Motifs Found		motif file (matrix)
16 A C T G A C T G A C G T A C G T A C G T A C T G A C T G A C T G A G T C C G T A 1e-115-2.656e+023.10%0.04%35.3bp (60.1bp)PB0133.1_Hic1_2/Jaspar(0.753)
More Information | Similar Motifs Found		motif file (matrix)
17 A C G T A G T C A C G T A C T G A C T G C G T A C G T A C G T A C G T A A G T C 1e-98-2.276e+023.18%0.07%36.7bp (57.5bp)Nfatc1/MA0624.3/Jaspar(0.774)
More Information | Similar Motifs Found		motif file (matrix)
18 A C T G A C T G A C G T C G T A C G T A G T C A A C T G A C G T A T G C A C G T A G T C C G T A 1e-88-2.039e+021.33%0.00%40.7bp (25.6bp)ZNF75D/MA1601.2/Jaspar(0.590)
More Information | Similar Motifs Found		motif file (matrix)
19 C G A T T A C G T C G A A G T C G T C A C T G A T A G C C T G A 1e-85-1.959e+0260.39%40.84%55.5bp (67.8bp)Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer(0.910)
More Information | Similar Motifs Found		motif file (matrix)
20 C G T A A C G T A C G T A G T C A C T G C G T A A G T C A G T C 1e-80-1.855e+022.81%0.08%42.7bp (52.1bp)NR2C2/MA1536.2/Jaspar(0.613)
More Information | Similar Motifs Found		motif file (matrix)
21 A G T C C G T A A C T G A C T G A C T G A C G T C G T A A C G T C G T A A C G T A C G T A C T G 1e-79-1.827e+021.21%0.00%74.7bp (0.0bp)ZNF211/MA1974.2/Jaspar(0.684)
More Information | Similar Motifs Found		motif file (matrix)
22 G C A T A C T G A C T G C G T A C G T A A C G T A C T G A G C T 1e-70-1.613e+0211.58%3.41%52.2bp (65.0bp)TEAD4/MA0809.3/Jaspar(0.995)
More Information | Similar Motifs Found		motif file (matrix)
23 C G T A C G T A A G C T A C T G A C T G A C T G A C G T A C G T 1e-54-1.245e+024.14%0.54%27.3bp (64.1bp)ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer(0.708)
More Information | Similar Motifs Found		motif file (matrix)
24 G T A C A G T C C T A G A C G T T C A G C T G A A G T C T G A C C G A T G A C T 1e-44-1.032e+0216.28%7.71%54.9bp (65.9bp)NR2F2/MA1111.2/Jaspar(0.930)
More Information | Similar Motifs Found		motif file (matrix)
25 C G A T C T A G C T A G A T G C C G T A T A C G C T G A T A G C C A G T A T C G T A G C A G T C 1e-41-9.523e+0116.85%8.38%52.9bp (75.0bp)Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer(0.881)
More Information | Similar Motifs Found		motif file (matrix)
26 A G T C A C G T A C T G A C T G A G T C C G T A A G T C A C T G A C T G A C T G C G T A A G T C 1e-35-8.188e+010.60%0.00%80.0bp (5.5bp)PB0147.1_Max_2/Jaspar(0.709)
More Information | Similar Motifs Found		motif file (matrix)
27 A C T G C G T A A G T C A C G T A C G T A G T C A C G T A C T G A C G T A C G T A G T C A C T G 1e-35-8.188e+010.60%0.00%38.7bp (0.0bp)ZIM3/MA1709.2/Jaspar(0.713)
More Information | Similar Motifs Found		motif file (matrix)
28 C G T A A C G T A C G T A C T G A C T G A C G T A G T C A G T C A G T C A C T G 1e-28-6.630e+010.72%0.01%80.7bp (50.3bp)POL011.1_XCPE1/Jaspar(0.680)
More Information | Similar Motifs Found		motif file (matrix)
29 C G T A C G T A A C T G A C T G A C T G A C G T C G T A C G T A 1e-27-6.278e+012.37%0.37%45.0bp (66.1bp)ZNF652/MA1657.2/Jaspar(0.727)
More Information | Similar Motifs Found		motif file (matrix)
30 A G T C A G T C A G T C A C G T A C T G A C G T A C G T C G T A 1e-26-6.112e+012.61%0.47%62.0bp (67.4bp)GRHL2/MA1105.3/Jaspar(0.706)
More Information | Similar Motifs Found		motif file (matrix)
31 G A T C A T C G A C G T C G A T G T C A A C G T A G T C A C G T 1e-24-5.575e+019.61%4.67%55.7bp (63.2bp)GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer(0.957)
More Information | Similar Motifs Found		motif file (matrix)
32 A C G T A G T C A G T C C G T A A C G T A C T G A C G T C G T A G T A C C G T A C G T A A C G T 1e-19-4.519e+010.36%0.00%45.0bp (2.0bp)PH0083.1_Irx3_1/Jaspar(0.689)
More Information | Similar Motifs Found		motif file (matrix)
33 A C G T C G T A A G T C A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G C G T A 1e-17-3.939e+010.32%0.00%51.9bp (0.0bp)ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer(0.665)
More Information | Similar Motifs Found		motif file (matrix)
34 A G T C A C G T A C G T A G T C A C G T C G T A C G T A A G T C A G T C A C T G 1e-12-2.889e+010.28%0.00%17.2bp (39.8bp)BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer(0.638)
More Information | Similar Motifs Found		motif file (matrix)