Homer de novo Motif Results (/net/shendure/vol2/projects/cxqiu/work/jax/atac_seq/novaseq/14_crested/core_region/call_motif/Brain_capillary_endothelial_cells/)

Non-redundant Motif File of Results
Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 1380
Total background sequences = 90879
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 T C G A A G T C C G A T A G C T G A T C A T G C G C A T A T C G G A C T A T C G 1e-314-7.243e+0260.58%15.59%51.3bp (70.1bp)Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.960)
More Information | Similar Motifs Found		motif file (matrix)
2 G C T A T A G C G C T A C G A T G T A C C T G A C G T A C T G A T A C G T C A G 1e-193-4.466e+0228.91%4.62%49.1bp (70.8bp)Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer(0.973)
More Information | Similar Motifs Found		motif file (matrix)
3 C T G A G A C T C T G A G C T A C G T A A G T C G C T A T C G A 1e-179-4.142e+0238.48%9.60%50.9bp (66.5bp)Foxf1/MA1606.2/Jaspar(0.968)
More Information | Similar Motifs Found		motif file (matrix)
4 T C G A C G T A A G T C C T G A C G T A C G A T C T G A T C A G A T G C G T A C 1e-58-1.344e+0215.22%4.10%56.6bp (63.1bp)SOX15/MA1152.2/Jaspar(0.938)
More Information | Similar Motifs Found		motif file (matrix)
5 C T A G C T G A A C G T A C G T G A T C G C T A A G T C C G A T C G T A C T A G A C T G A G T C 1e-29-6.760e+011.45%0.02%50.7bp (40.5bp)HMBOX1/MA0895.2/Jaspar(0.607)
More Information | Similar Motifs Found		motif file (matrix)
6 C G T A A C T G A C T G A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C G T 1e-27-6.362e+010.80%0.00%27.4bp (25.7bp)RBPJ/MA1116.2/Jaspar(0.707)
More Information | Similar Motifs Found		motif file (matrix)
7 A G T C A G T C C G T A A C T G A C T G A C T G C G T A A C G T C G T A C G T A C G T A A C G T 1e-24-5.703e+010.72%0.00%18.4bp (0.0bp)PH0130.1_Otx2/Jaspar(0.662)
More Information | Similar Motifs Found		motif file (matrix)
8 A G T C A C G T A C T G A C T G A G T C C G T A C G T A A C G T C G T A A C T G G T C A C G T A 1e-24-5.601e+010.80%0.00%38.9bp (37.9bp)CDX1/MA0878.3/Jaspar(0.706)
More Information | Similar Motifs Found		motif file (matrix)
9 T G A C T C A G T C A G T C G A C T G A C T A G A T G C A G T C A G T C G A T C A G C T A C G T 1e-23-5.440e+0111.96%5.00%54.6bp (68.8bp)Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer(0.624)
More Information | Similar Motifs Found		motif file (matrix)
10 A G T C A C G T C G T A A T G C C T G A C G T A A C G T A C G T G T C A A C G T A G C T A C T G 1e-21-5.053e+010.65%0.00%52.0bp (0.0bp)ZNF35/MA2333.1/Jaspar(0.715)
More Information | Similar Motifs Found		motif file (matrix)
11 A C T G A G T C A C G T C G T A A C G T C G T A C G T A A C T G C G T A A G T C C G T A A C T G 1e-21-5.011e+010.72%0.00%18.4bp (1.1bp)CDX4/MA1473.2/Jaspar(0.578)
More Information | Similar Motifs Found		motif file (matrix)
12 A C T G A C G T A G T C A C G T A G T C C G T A A G T C C G T A A C G T C G T A A G T C A G T C 1e-21-5.011e+010.72%0.00%18.4bp (41.9bp)TEAD3/MA0808.1/Jaspar(0.630)
More Information | Similar Motifs Found		motif file (matrix)
13 C G T A C G T A A G T C C G T A A C G T A C G T A G T C A G T C 1e-21-4.870e+013.99%0.78%55.0bp (71.2bp)TEAD2/MA1121.2/Jaspar(0.932)
More Information | Similar Motifs Found		motif file (matrix)
14 A G T C G A T C C G T A A T C G G A T C T C A G A C T G A T C G 1e-19-4.559e+0126.81%16.88%56.0bp (69.0bp)Zic3/MA0697.3/Jaspar(0.784)
More Information | Similar Motifs Found		motif file (matrix)
15 A G T C A G T C C G T A A C T G A C T G A G T C A C G T A C T G A C G T A C G T A C G T A C T G 1e-19-4.414e+010.58%0.00%39.8bp (44.2bp)ZNF341/MA1655.2/Jaspar(0.700)
More Information | Similar Motifs Found		motif file (matrix)
16 C T G A A C G T A C T G A C T G A G T C G T A C A C G T G T C A C T G A A C T G C T A G A C G T 1e-19-4.414e+010.58%0.00%33.7bp (38.5bp)AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer(0.650)
More Information | Similar Motifs Found		motif file (matrix)
17 C G T A T G A C A G C T A C G T A C G T A G T C C G T A A C T G A C T G A C T G 1e-18-4.351e+013.70%0.76%59.9bp (71.9bp)Prdm4/MA1647.3/Jaspar(0.675)
More Information | Similar Motifs Found		motif file (matrix)
18 A G T C C G T A A T G C A G C T G T A C A G T C A G C T C G T A A C G T C G T A T G C A G C T A 1e-17-3.918e+010.72%0.01%57.3bp (41.2bp)Hoxa13/MA0650.4/Jaspar(0.623)
More Information | Similar Motifs Found		motif file (matrix)
19 A C T G A C T G A C G T A C G T A C T G A G T C A G T C A C T G A G T C A G T C 1e-16-3.787e+010.51%0.00%36.0bp (0.0bp)E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer(0.741)
More Information | Similar Motifs Found		motif file (matrix)
20 A G T C A G T C A C T G A G T C A G T C A C G T A C G T A G T C C G T A A C T G A C G T A C G T 1e-16-3.787e+010.51%0.00%39.5bp (0.0bp)ZNF91(Zf)/HEK-ZNF91.HA-ChIP-Seq(GSE162571)/Homer(0.665)
More Information | Similar Motifs Found		motif file (matrix)
21 A G T C A C G T A C T G A C T G A G T C A C G T C G T A A C T G A C T G A C G T A C G T A C T G 1e-14-3.303e+010.51%0.00%33.1bp (62.7bp)Rfx6/MA1724.2/Jaspar(0.602)
More Information | Similar Motifs Found		motif file (matrix)
22 A C G T A C G T C G T A A C G T A G T C A C T G A G T C C G T A A C G T A G T C 1e-13-3.020e+010.51%0.00%5.2bp (21.6bp)Mecom/MA0029.2/Jaspar(0.668)
More Information | Similar Motifs Found		motif file (matrix)
23 * C A T G C G T A A C T G G T A C A C G T A C G T A G T C T A G C A C G T G C A T A G T C A C G T 1e-10-2.429e+011.96%0.39%60.6bp (68.4bp)IKZF2/MA2326.1/Jaspar(0.662)
More Information | Similar Motifs Found		motif file (matrix)
24 * A C T G A C T G A G T C A C G T A G T C A C G T A C G T A G T C 1e-10-2.352e+017.46%3.73%51.2bp (69.8bp)ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer(0.828)
More Information | Similar Motifs Found		motif file (matrix)
25 * C T G A A C G T A G T C A G C T A T C G A C T G A C G T A G T C 1e-8-2.061e+015.00%2.22%55.8bp (65.3bp)ZNF416/MA1979.2/Jaspar(0.783)
More Information | Similar Motifs Found		motif file (matrix)
26 * A G T C C G T A C G T A A G T C A G T C A C G T A C G T A C G T A C G T A C G T 1e-7-1.783e+010.80%0.08%29.9bp (75.1bp)GRHL2/MA1105.3/Jaspar(0.725)
More Information | Similar Motifs Found		motif file (matrix)
27 * A C G T C G T A A T C G C T A G A C T G A C G T C G T A A C G T 1e-5-1.330e+011.81%0.60%61.9bp (57.1bp)Six3/MA0631.2/Jaspar(0.781)
More Information | Similar Motifs Found		motif file (matrix)
28 * C T G A G A C T T C A G A C G T C T G A A C G T T C G A C G A T T G C A A C G T 1e-4-9.987e+001.16%0.35%53.3bp (44.5bp)FOXB1/MA0845.1/Jaspar(0.770)
More Information | Similar Motifs Found		motif file (matrix)
29 * A C T G C G T A A C T G A G T C A C G T A G T C A C G T C T A G 1e-3-8.842e+003.12%1.69%45.9bp (65.0bp)PB0099.1_Zfp691_1/Jaspar(0.782)
More Information | Similar Motifs Found		motif file (matrix)
30 * A C T G A C G T A C G T A C T G A C T G A C T G A C T G A C G T A C G T A C T G 1e-2-4.684e+000.29%0.06%26.8bp (62.2bp)ZNF449/MA1656.2/Jaspar(0.754)
More Information | Similar Motifs Found		motif file (matrix)