Rank Motif Name P-value log P-pvalue q-value (Benjamini) # Target Sequences with Motif % of Targets Sequences with Motif # Background Sequences with Motif % of Background Sequences with Motif Motif File
SVG 1
G
A
C
T
C
G
A
T
C
T
G
A
G
T
C
A
G
A
C
T
C
G
A
T
T
C
G
A
C
G
T
A
G
C
T
A
G
C
T
A
T
G
A
C
G
T
A
C
C
G
T
A
A
C
T
G
T
G
C
A
C
G
A
T
A
C
T
G
A
C
G
T
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer 1e-789 -1.818e+03 0.0000 931.0 19.18% 1063.9 1.17% motif file (matrix) svg 2
T
A
C
G
T
G
C
A
A
G
T
C
C
G
T
A
A
C
G
T
T
G
A
C
A
C
G
T
A
C
T
G
A
C
T
G
G
C
A
T
TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer 1e-242 -5.593e+02 0.0000 1703.0 35.09% 14128.7 15.57% motif file (matrix) svg 3
C
T
A
G
T
C
G
A
T
G
A
C
A
G
T
C
C
G
T
A
A
C
T
G
G
T
A
C
A
C
G
T
A
C
T
G
A
C
T
G
BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer 1e-227 -5.227e+02 0.0000 1593.0 32.83% 13109.9 14.45% motif file (matrix) svg 4
T
G
A
C
A
G
T
C
C
G
T
A
A
C
T
G
G
T
A
C
A
C
G
T
A
C
T
G
A
C
G
T
G
A
C
T
G
A
T
C
Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer 1e-201 -4.631e+02 0.0000 1789.0 36.86% 16661.8 18.37% motif file (matrix) svg 5
T
G
C
A
C
T
G
A
A
T
G
C
G
T
C
A
A
C
G
T
A
T
G
C
A
C
G
T
A
C
T
G
A
C
T
G
T
G
C
A
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer 1e-184 -4.246e+02 0.0000 785.0 16.18% 4471.8 4.93% motif file (matrix) svg 6
T
C
G
A
T
G
A
C
G
T
A
C
C
G
T
A
C
A
G
T
T
G
A
C
A
C
G
T
A
C
T
G
A
G
C
T
A
G
C
T
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer 1e-145 -3.346e+02 0.0000 1475.0 30.39% 14186.3 15.64% motif file (matrix) svg 7
C
T
G
A
T
G
A
C
T
G
A
C
C
G
T
A
A
C
G
T
T
G
A
C
A
G
C
T
C
T
A
G
A
C
G
T
G
A
C
T
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer 1e-144 -3.319e+02 0.0000 1713.0 35.30% 17736.2 19.55% motif file (matrix) svg 8
C
G
A
T
T
G
C
A
T
G
C
A
G
A
T
C
C
G
T
A
A
C
T
G
T
G
A
C
G
A
C
T
C
A
T
G
A
C
T
G
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer 1e-143 -3.307e+02 0.0000 1103.0 22.73% 9163.1 10.10% motif file (matrix) svg 9
T
C
A
G
A
C
G
T
T
C
G
A
T
A
G
C
A
G
T
C
C
G
T
A
A
C
T
G
G
T
A
C
A
C
G
T
A
C
T
G
A
T
C
G
A
G
T
C
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer 1e-110 -2.539e+02 0.0000 1106.0 22.79% 10348.9 11.41% motif file (matrix) svg 10
C
T
G
A
T
C
A
G
G
T
A
C
G
C
T
A
A
C
T
G
T
G
A
C
G
C
A
T
C
A
T
G
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer 1e-79 -1.838e+02 0.0000 2953.0 60.85% 42874.8 47.26% motif file (matrix) svg 11
G
T
C
A
T
G
C
A
G
C
T
A
A
G
T
C
C
G
T
A
A
C
T
G
T
G
A
C
G
C
A
T
T
C
A
G
C
A
G
T
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer 1e-61 -1.406e+02 0.0000 1043.0 21.49% 11693.9 12.89% motif file (matrix) svg 12
T
C
G
A
A
G
T
C
C
G
T
A
A
T
C
G
T
A
G
C
A
C
G
T
A
C
T
G
A
G
C
T
A
C
G
T
A
G
T
C
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer 1e-58 -1.354e+02 0.0000 1936.0 39.89% 26296.1 28.99% motif file (matrix) svg 13
T
C
A
G
T
G
A
C
G
T
A
C
C
G
T
A
A
C
G
T
T
G
A
C
A
C
G
T
T
C
A
G
A
G
C
T
G
A
C
T
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer 1e-58 -1.351e+02 0.0000 744.0 15.33% 7472.9 8.24% motif file (matrix) svg 14
T
G
C
A
A
G
C
T
C
T
G
A
A
T
C
G
G
A
C
T
C
T
A
G
G
T
A
C
G
A
T
C
G
T
C
A
A
G
T
C
G
T
A
C
G
A
C
T
C
T
A
G
A
T
C
G
G
C
A
T
C
A
T
G
C
A
T
G
G
A
T
C
G
T
A
C
C
T
G
A
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer 1e-56 -1.305e+02 0.0000 233.0 4.80% 1253.7 1.38% motif file (matrix) svg 15
C
A
G
T
T
C
A
G
T
C
G
A
A
G
T
C
C
G
T
A
A
C
T
G
T
G
A
C
C
G
A
T
A
C
T
G
A
C
T
G
A
C
G
T
A
T
C
G
Atoh7(bHLH)/Retina-Atoh7-CutnRun(GSE156756)/Homer 1e-43 -1.001e+02 0.0000 699.0 14.40% 7587.2 8.36% motif file (matrix) svg 16
A
G
T
C
G
A
C
T
C
A
G
T
A
C
T
G
C
T
A
G
T
G
A
C
G
C
T
A
A
T
G
C
G
C
A
T
A
T
C
G
C
G
A
T
A
C
T
G
G
A
T
C
G
T
A
C
G
T
C
A
C
T
G
A
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer 1e-37 -8.714e+01 0.0000 381.0 7.85% 3450.7 3.80% motif file (matrix) svg 17
T
A
G
C
A
G
T
C
T
G
A
C
A
G
T
C
C
T
A
G
A
T
C
G
A
G
T
C
C
A
T
G
T
G
A
C
A
G
T
C
G
T
A
C
A
G
T
C
A
G
T
C
G
C
A
T
C
T
A
G
A
T
C
G
G
C
A
T
A
C
T
G
A
T
C
G
G
A
T
C
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer 1e-37 -8.701e+01 0.0000 277.0 5.71% 2156.7 2.38% motif file (matrix) svg 18
T
A
G
C
T
A
G
C
G
C
A
T
C
A
T
G
A
C
T
G
G
C
T
A
C
G
T
A
A
C
G
T
A
C
T
G
G
A
T
C
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer 1e-32 -7.595e+01 0.0000 624.0 12.86% 7091.7 7.82% motif file (matrix) svg 19
A
T
G
C
G
A
T
C
C
G
A
T
C
T
A
G
A
C
T
G
G
C
T
A
C
G
T
A
A
G
C
T
A
C
T
G
A
G
C
T
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer 1e-32 -7.549e+01 0.0000 422.0 8.70% 4213.2 4.64% motif file (matrix) svg 20
T
G
A
C
G
T
A
C
C
G
T
A
A
C
T
G
T
G
A
C
C
G
A
T
A
C
T
G
A
T
C
G
A
G
C
T
T
A
C
G
T
C
G
A
T
A
G
C
G
T
A
C
C
G
T
A
A
T
C
G
T
G
A
C
G
C
A
T
A
C
T
G
A
C
T
G
A
T
G
C
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer 1e-32 -7.396e+01 0.0000 164.0 3.38% 1033.1 1.14% motif file (matrix) svg 21
T
G
A
C
A
G
T
C
C
T
G
A
T
G
A
C
C
G
T
A
A
C
G
T
A
C
G
T
A
G
T
C
A
G
T
C
C
G
T
A
TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer 1e-32 -7.380e+01 0.0000 685.0 14.11% 8063.4 8.89% motif file (matrix) svg 22
G
A
T
C
G
T
A
C
C
G
A
T
A
C
T
G
A
C
T
G
C
G
T
A
C
G
T
A
A
C
G
T
A
C
T
G
G
A
T
C
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer 1e-30 -7.049e+01 0.0000 477.0 9.83% 5091.5 5.61% motif file (matrix) svg 23
C
T
A
G
C
G
T
A
G
T
C
A
C
G
T
A
A
G
T
C
G
A
T
C
A
G
C
T
C
T
A
G
C
G
T
A
A
C
G
T
G
T
C
A
G
A
T
C
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer 1e-29 -6.799e+01 0.0000 629.0 12.96% 7386.2 8.14% motif file (matrix) svg 24
A
G
C
T
C
T
A
G
T
G
A
C
C
G
T
A
A
C
G
T
C
G
A
T
A
G
T
C
A
G
T
C
C
T
G
A
C
A
T
G
TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer 1e-28 -6.635e+01 0.0000 759.0 15.64% 9428.3 10.39% motif file (matrix) svg 25
C
A
G
T
A
C
T
G
C
G
T
A
G
T
C
A
C
G
T
A
A
G
C
T
G
A
T
C
A
G
C
T
A
C
T
G
C
G
T
A
A
G
T
C
G
T
C
A
A
G
T
C
A
G
T
C
A
T
C
G
Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer 1e-28 -6.500e+01 0.0000 79.0 1.63% 306.2 0.34% motif file (matrix) svg 26
C
T
A
G
T
A
C
G
G
A
T
C
G
T
A
C
C
T
G
A
A
G
C
T
T
G
C
A
G
C
T
A
C
G
T
A
G
C
A
T
G
A
T
C
G
C
T
A
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer 1e-26 -6.079e+01 0.0000 322.0 6.64% 3147.5 3.47% motif file (matrix) svg 27
T
A
C
G
T
C
A
G
G
A
T
C
G
T
A
C
T
C
G
A
G
A
C
T
G
C
T
A
G
C
T
A
G
C
T
A
C
G
T
A
G
A
T
C
G
T
C
A
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer 1e-24 -5.702e+01 0.0000 539.0 11.11% 6352.0 7.00% motif file (matrix) svg 28
C
T
A
G
A
G
T
C
T
A
C
G
T
A
C
G
T
G
A
C
C
G
T
A
A
C
T
G
T
A
G
C
G
C
A
T
C
A
T
G
A
T
G
C
A
G
C
T
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer 1e-24 -5.655e+01 0.0000 1132.0 23.33% 15846.0 17.47% motif file (matrix) svg 29
C
T
A
G
A
C
T
G
C
T
A
G
T
C
A
G
T
C
A
G
T
A
C
G
C
T
A
G
A
C
T
G
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer 1e-23 -5.518e+01 0.0000 1349.0 27.80% 19578.6 21.58% motif file (matrix) svg 30
C
T
A
G
C
A
T
G
T
G
C
A
A
C
G
T
A
G
T
C
C
G
T
A
C
A
T
G
T
C
A
G
A
C
G
T
A
C
G
T
G
C
T
A
A
G
T
C
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer 1e-23 -5.436e+01 0.0000 195.0 4.02% 1615.6 1.78% motif file (matrix) svg 31
G
A
T
C
G
A
T
C
A
G
T
C
G
T
A
C
C
G
A
T
G
T
A
C
G
T
A
C
A
G
T
C
A
G
T
C
A
G
T
C
G
C
T
A
G
A
T
C
ZNF148(Zf)/MDAMB231-ZNF148-ChIP-Seq(GSE147020)/Homer 1e-21 -5.045e+01 0.0000 868.0 17.89% 11760.4 12.96% motif file (matrix) svg 32
C
G
T
A
C
A
T
G
A
G
T
C
G
A
C
T
T
G
C
A
C
G
T
A
A
C
G
T
A
C
G
T
C
T
G
A
T
C
A
G
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer 1e-20 -4.779e+01 0.0000 618.0 12.73% 7866.3 8.67% motif file (matrix) svg 33
A
T
C
G
A
T
C
G
A
T
G
C
G
A
C
T
T
C
G
A
C
G
T
A
G
C
A
T
A
G
C
T
C
T
G
A
T
A
C
G
DLX2(Homeobox)/BasalGanglia-Dlx2-ChIP-seq(GSE124936)/Homer 1e-20 -4.773e+01 0.0000 812.0 16.73% 10965.9 12.09% motif file (matrix) svg 34
C
G
T
A
A
C
G
T
A
C
G
T
A
C
G
T
A
C
G
T
A
G
T
C
A
G
T
C
C
T
G
A
A
G
C
T
A
G
C
T
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer 1e-20 -4.723e+01 0.0000 578.0 11.91% 7262.1 8.01% motif file (matrix) svg 35
A
G
T
C
G
A
C
T
T
G
C
A
C
G
T
A
A
C
G
T
A
C
G
T
C
T
G
A
T
C
A
G
T
A
G
C
G
A
C
T
Gsx2(Homeobox)/LGE-Gsx2.Flag-ChIP-Seq(GSE162589)/Homer 1e-20 -4.721e+01 0.0000 754.0 15.54% 10049.4 11.08% motif file (matrix) svg 36
A
T
C
G
A
T
G
C
A
G
T
C
T
A
G
C
G
A
C
T
T
C
G
A
G
C
T
A
G
C
A
T
A
G
C
T
C
T
G
A
DLX1(Homeobox)/BasalGanglia-Dlx1-ChIP-seq(GSE124936)/Homer 1e-20 -4.636e+01 0.0000 729.0 15.02% 9683.0 10.67% motif file (matrix) svg 37
T
C
A
G
C
T
A
G
A
T
G
C
G
A
C
T
T
G
C
A
C
G
T
A
A
G
C
T
A
C
G
T
C
T
G
A
T
A
C
G
En1(Homeobox)/SUM149-EN1-ChIP-Seq(GSE120957)/Homer 1e-19 -4.515e+01 0.0000 969.0 19.97% 13664.6 15.06% motif file (matrix) svg 38
A
G
T
C
C
G
A
T
A
C
T
G
A
T
C
G
T
G
A
C
G
C
T
A
C
A
T
G
A
T
C
G
T
G
A
C
C
G
A
T
A
C
T
G
T
A
G
C
G
T
A
C
G
T
C
A
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer 1e-19 -4.482e+01 0.0000 353.0 7.27% 3944.7 4.35% motif file (matrix) svg 39
C
G
T
A
C
G
T
A
A
G
C
T
G
A
C
T
T
G
C
A
G
T
C
A
A
C
G
T
A
G
C
T
C
T
G
A
T
C
A
G
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer 1e-19 -4.403e+01 0.0000 878.0 18.09% 12209.5 13.46% motif file (matrix) svg 40
A
C
T
G
C
A
G
T
A
C
G
T
C
G
T
A
C
G
T
A
A
C
G
T
A
C
T
G
C
T
G
A
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer 1e-18 -4.311e+01 0.0000 1276.0 26.29% 18972.6 20.91% motif file (matrix) svg 41
T
A
C
G
T
A
G
C
A
G
T
C
A
G
C
T
T
G
C
A
C
G
T
A
A
C
G
T
A
C
G
T
C
T
G
A
T
C
A
G
Emx2(Homeobox)/Cortex-Emx2-ChIP-Seq(GSE183130)/Homer 1e-18 -4.273e+01 0.0000 657.0 13.54% 8676.7 9.56% motif file (matrix) svg 42
C
A
G
T
C
G
A
T
G
C
A
T
G
C
A
T
G
T
C
A
A
G
C
T
C
A
T
G
C
T
A
G
A
T
G
C
G
T
A
C
Hoxa11(Homeobox)/ChickenMSG-Hoxa11.Flag-ChIP-Seq(GSE86088)/Homer 1e-18 -4.185e+01 0.0000 1251.0 25.78% 18614.4 20.52% motif file (matrix) svg 43
A
G
T
C
G
T
A
C
C
T
G
A
A
C
G
T
G
T
C
A
G
C
T
A
C
G
T
A
G
C
A
T
G
A
T
C
G
C
T
A
Hoxc10(Homeobox)/EB-Hoxc10.iFlag-ChIP-Seq(GSE142377)/Homer 1e-18 -4.179e+01 0.0000 662.0 13.64% 8794.3 9.69% motif file (matrix) svg 44
C
G
A
T
A
C
G
T
A
C
G
T
A
G
C
T
A
G
C
T
G
A
T
C
G
A
T
C
G
C
T
A
A
G
C
T
A
C
G
T
A
T
C
G
T
A
C
G
NFATC2(RHD)/Islets-NFATC2-ChIP-Seq(GSE158496)/Homer 1e-17 -4.023e+01 0.0000 1208.0 24.89% 17968.0 19.81% motif file (matrix) svg 45
C
T
G
A
C
G
A
T
C
T
A
G
C
G
T
A
C
G
A
T
C
G
A
T
C
A
G
T
C
T
G
A
G
A
C
T
C
A
T
G
C
T
A
G
A
G
T
C
Hoxd9(Homeobox)/EB-Hoxd9.HA-ChIP-Seq(GSE142377)/Homer 1e-17 -3.927e+01 0.0000 224.0 4.62% 2255.7 2.49% motif file (matrix) svg 46
T
C
G
A
A
G
T
C
C
G
T
A
A
T
C
G
A
T
G
C
C
G
A
T
A
C
T
G
A
G
T
C
A
G
C
T
A
C
T
G
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer 1e-16 -3.889e+01 0.0000 698.0 14.38% 9498.7 10.47% motif file (matrix) svg 47
A
G
C
T
G
T
C
A
C
G
T
A
A
C
G
T
A
C
G
T
C
T
G
A
T
C
A
G
A
T
G
C
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer 1e-16 -3.880e+01 0.0000 569.0 11.72% 7433.6 8.19% motif file (matrix) svg 48
C
T
A
G
T
A
G
C
A
G
T
C
G
T
C
A
C
T
G
A
A
C
G
T
C
G
T
A
C
G
T
A
C
G
T
A
G
C
T
A
Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer 1e-16 -3.837e+01 0.0000 871.0 17.95% 12367.7 13.63% motif file (matrix) svg 49
A
G
C
T
A
C
G
T
A
C
T
G
A
T
G
C
A
G
T
C
C
G
T
A
C
T
G
A
T
A
C
G
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer 1e-16 -3.711e+01 0.0000 1130.0 23.28% 16812.0 18.53% motif file (matrix) svg 50
T
C
A
G
T
A
C
G
G
A
T
C
G
T
A
C
T
C
G
A
C
G
A
T
C
T
G
A
C
G
T
A
G
C
T
A
C
G
T
A
Hoxd11(Homeobox)/ChickenMSG-Hoxd11.Flag-ChIP-Seq(GSE86088)/Homer 1e-14 -3.453e+01 0.0000 1284.0 26.46% 19631.7 21.64% motif file (matrix) svg 51
A
T
G
C
T
A
C
G
A
G
T
C
G
A
C
T
T
G
C
A
C
T
G
A
G
A
C
T
A
C
G
T
C
T
G
A
T
C
A
G
LHX9(Homeobox)/Hct116-LHX9.V5-ChIP-Seq(GSE116822)/Homer 1e-14 -3.447e+01 0.0000 729.0 15.02% 10210.2 11.25% motif file (matrix) svg 52
C
G
A
T
G
A
C
T
C
G
A
T
T
C
A
G
G
A
C
T
A
C
G
T
C
A
G
T
C
T
G
A
G
A
C
T
G
A
C
T
A
G
C
T
C
G
A
T
A
C
T
G
A
T
C
G
G
T
A
C
G
C
T
A
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer 1e-14 -3.366e+01 0.0000 62.0 1.28% 351.8 0.39% motif file (matrix) svg 53
T
A
C
G
A
T
C
G
G
A
T
C
G
T
C
A
C
T
G
A
G
C
A
T
C
G
A
T
G
C
T
A
T
C
G
A
G
C
T
A
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer 1e-14 -3.339e+01 0.0000 410.0 8.45% 5148.0 5.67% motif file (matrix) svg 54
T
A
G
C
G
T
A
C
A
G
T
C
G
T
A
C
C
G
A
T
A
G
T
C
A
G
T
C
A
G
T
C
A
G
T
C
A
G
T
C
C
G
T
A
G
A
T
C
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer 1e-14 -3.264e+01 0.0000 331.0 6.82% 3969.9 4.38% motif file (matrix) svg 55
T
A
G
C
G
A
T
C
G
T
A
C
C
T
G
A
G
C
A
T
C
T
G
A
C
G
T
A
T
G
C
A
C
G
T
A
G
A
T
C
Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer 1e-13 -3.216e+01 0.0000 1301.0 26.81% 20085.9 22.14% motif file (matrix) svg 56
A
G
T
C
C
G
A
T
C
T
G
A
C
G
T
A
A
C
G
T
C
A
G
T
T
C
A
G
T
G
A
C
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer 1e-13 -3.187e+01 0.0000 1024.0 21.10% 15312.3 16.88% motif file (matrix) svg 57
C
T
A
G
T
C
A
G
C
A
G
T
T
C
A
G
A
C
T
G
A
C
T
G
G
A
T
C
C
T
A
G
A
C
T
G
C
T
A
G
T
C
A
G
A
T
G
C
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer 1e-13 -3.137e+01 0.0000 1475.0 30.39% 23201.0 25.57% motif file (matrix) svg 58
A
G
C
T
G
C
A
T
A
C
T
G
A
C
G
T
A
G
T
C
A
C
G
T
C
T
A
G
T
A
C
G
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer 1e-13 -3.076e+01 0.0000 1709.0 35.22% 27414.4 30.22% motif file (matrix) svg 59
T
G
A
C
A
T
G
C
C
G
T
A
A
T
C
G
A
T
G
C
C
A
G
T
C
A
T
G
A
C
T
G
A
G
T
C
G
T
A
C
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer 1e-13 -3.051e+01 0.0000 1257.0 25.90% 19429.5 21.42% motif file (matrix) svg 60
A
T
G
C
T
A
C
G
A
G
C
T
T
G
C
A
C
G
T
A
C
G
A
T
A
C
G
T
C
T
G
A
DLX5(Homeobox)/BasalGanglia-Dlx5-ChIP-seq(GSE124936)/Homer 1e-13 -3.030e+01 0.0000 417.0 8.59% 5371.4 5.92% motif file (matrix) svg 61
C
G
A
T
A
C
G
T
A
C
G
T
A
C
G
T
C
G
T
A
A
G
C
T
C
A
T
G
C
T
A
G
A
T
C
G
G
A
T
C
Hoxc13(Homeobox)/EB-Hoxc13.HA-ChIP-Seq(GSE142377)/Homer 1e-12 -2.988e+01 0.0000 759.0 15.64% 10945.2 12.07% motif file (matrix) svg 62
T
C
A
G
A
G
C
T
A
C
G
T
A
C
G
T
G
T
A
C
G
A
T
C
C
G
T
A
C
T
A
G
C
A
T
G
G
T
C
A
C
G
T
A
T
C
G
A
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer 1e-12 -2.804e+01 0.0000 558.0 11.50% 7722.6 8.51% motif file (matrix) svg 63
C
T
G
A
C
G
A
T
C
T
A
G
C
G
T
A
A
G
C
T
C
G
A
T
C
A
G
T
C
T
G
A
G
A
C
T
C
T
A
G
C
T
A
G
A
T
G
C
PBX2(Homeobox)/K562-PBX2-ChIP-Seq(Encode)/Homer 1e-12 -2.781e+01 0.0000 402.0 8.28% 5233.3 5.77% motif file (matrix) svg 64
C
T
G
A
T
C
A
G
G
T
A
C
T
G
C
A
A
G
T
C
C
G
T
A
A
G
T
C
A
C
T
G
A
C
G
T
A
C
T
G
MNT(bHLH)/HepG2-MNT-ChIP-Seq(Encode)/Homer 1e-11 -2.718e+01 0.0000 603.0 12.43% 8501.8 9.37% motif file (matrix) svg 65
C
G
A
T
A
C
G
T
A
C
G
T
A
C
G
T
C
G
T
A
A
G
C
T
C
A
G
T
C
T
A
G
A
T
C
G
A
C
T
G
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer 1e-11 -2.687e+01 0.0000 575.0 11.85% 8057.5 8.88% motif file (matrix) svg 66
T
C
G
A
C
A
G
T
A
C
T
G
A
G
C
T
C
G
T
A
C
G
T
A
A
C
G
T
A
C
G
T
C
T
G
A
T
A
G
C
Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer 1e-11 -2.602e+01 0.0000 346.0 7.13% 4427.7 4.88% motif file (matrix) svg 67
G
A
C
T
G
T
A
C
T
G
C
A
A
C
G
T
G
A
T
C
G
C
T
A
T
C
G
A
A
C
G
T
A
G
T
C
C
G
T
A
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer 1e-11 -2.590e+01 0.0000 458.0 9.44% 6204.1 6.84% motif file (matrix) svg 68
A
C
G
T
T
C
G
A
T
C
G
A
A
G
T
C
G
T
C
A
T
A
C
G
A
T
G
C
A
C
G
T
A
C
T
G
A
G
C
T
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer 1e-10 -2.453e+01 0.0000 475.0 9.79% 6542.1 7.21% motif file (matrix) svg 69
T
C
G
A
T
C
G
A
A
G
T
C
C
G
T
A
C
T
A
G
T
A
G
C
A
C
G
T
A
C
T
G
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer 1e-9 -2.234e+01 0.0000 694.0 14.30% 10292.4 11.35% motif file (matrix) svg 70
C
G
A
T
T
G
C
A
G
T
A
C
C
G
T
A
A
G
T
C
C
T
A
G
G
A
C
T
C
A
T
G
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer 1e-9 -2.096e+01 0.0000 867.0 17.87% 13339.6 14.70% motif file (matrix) svg 71
C
T
G
A
T
C
A
G
C
A
G
T
C
T
A
G
A
C
T
G
C
T
A
G
G
A
T
C
A
T
C
G
A
C
T
G
C
T
G
A
T
C
A
G
G
A
T
C
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer 1e-8 -2.053e+01 0.0000 891.0 18.36% 13785.8 15.20% motif file (matrix) svg 72
A
G
T
C
A
C
G
T
A
C
T
G
A
G
C
T
A
C
G
T
A
C
G
T
G
T
C
A
A
G
T
C
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer 1e-8 -2.049e+01 0.0000 1030.0 21.22% 16205.9 17.86% motif file (matrix) svg 73
C
G
A
T
C
T
A
G
C
T
G
A
A
T
G
C
C
T
G
A
T
C
G
A
C
G
T
A
C
T
G
A
T
C
G
A
T
A
G
C
A
G
T
C
C
G
T
A
A
C
T
G
T
C
G
A
A
T
G
C
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer 1e-8 -2.047e+01 0.0000 300.0 6.18% 3926.1 4.33% motif file (matrix) svg 74
C
T
G
A
A
C
T
G
A
C
T
G
A
G
T
C
A
G
T
C
A
G
C
T
C
T
A
G
T
A
C
G
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer 1e-8 -2.015e+01 0.0000 841.0 17.33% 12949.2 14.27% motif file (matrix) svg 75
A
C
T
G
G
A
T
C
G
A
C
T
A
C
T
G
A
C
G
T
C
A
T
G
A
C
T
G
A
C
G
T
A
G
C
T
C
G
A
T
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer 1e-8 -1.980e+01 0.0000 414.0 8.53% 5783.1 6.37% motif file (matrix) svg 76
C
G
A
T
C
T
A
G
C
G
T
A
G
A
C
T
C
A
G
T
C
T
A
G
C
G
T
A
A
G
C
T
C
A
T
G
C
T
A
G
HOXA1(Homeobox)/mES-Hoxa1-ChIP-Seq(SRP084292)/Homer 1e-8 -1.892e+01 0.0000 145.0 2.99% 1627.8 1.79% motif file (matrix) svg 77
C
T
A
G
T
A
C
G
G
A
T
C
G
T
C
A
T
C
G
A
A
C
G
T
T
C
A
G
C
G
T
A
C
G
T
A
C
G
T
A
Hoxd10(Homeobox)/ChickenMSG-Hoxd10.Flag-ChIP-Seq(GSE86088)/Homer 1e-7 -1.781e+01 0.0000 590.0 12.16% 8824.1 9.73% motif file (matrix) svg 78
T
A
G
C
C
T
A
G
T
C
G
A
G
A
C
T
A
C
T
G
C
T
G
A
A
G
T
C
T
C
A
G
G
C
A
T
T
G
A
C
C
T
G
A
A
G
C
T
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer 1e-7 -1.760e+01 0.0000 222.0 4.57% 2823.4 3.11% motif file (matrix) svg 79
T
G
C
A
A
C
T
G
T
A
C
G
A
T
G
C
A
G
T
C
G
A
C
T
T
C
G
A
A
T
C
G
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer 1e-7 -1.753e+01 0.0000 1161.0 23.92% 18765.2 20.69% motif file (matrix) svg 80
T
C
G
A
T
G
A
C
G
T
A
C
C
G
T
A
A
C
G
T
G
A
C
T
A
C
G
T
A
C
T
G
A
C
T
G
A
G
C
T
Mesp1(bHLH)/ESC-Mesp1-ChIP-Seq(GSE165102)/Homer 1e-7 -1.688e+01 0.0000 301.0 6.20% 4098.3 4.52% motif file (matrix) svg 81
T
C
G
A
A
C
T
G
A
C
T
G
C
G
T
A
C
G
T
A
T
C
G
A
A
G
T
C
C
T
G
A
A
T
C
G
G
T
A
C
G
C
A
T
C
A
T
G
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer 1e-7 -1.688e+01 0.0000 75.0 1.55% 704.6 0.78% motif file (matrix) svg 82
T
A
C
G
T
C
G
A
G
A
C
T
A
C
T
G
C
T
G
A
A
G
T
C
T
C
A
G
G
A
C
T
T
G
A
C
C
T
G
A
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer 1e-7 -1.685e+01 0.0000 307.0 6.33% 4196.3 4.63% motif file (matrix) svg 83
A
T
G
C
T
C
G
A
A
G
T
C
A
G
C
T
A
C
G
T
G
T
A
C
A
G
T
C
G
C
T
A
C
T
A
G
C
A
T
G
G
T
C
A
C
T
G
A
T
C
A
G
A
G
T
C
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer 1e-7 -1.680e+01 0.0000 423.0 8.72% 6091.1 6.71% motif file (matrix) svg 84
C
T
G
A
T
C
A
G
A
G
T
C
C
G
T
A
A
T
C
G
A
T
G
C
C
G
A
T
A
C
T
G
A
G
T
C
G
A
C
T
A
T
C
G
A
G
T
C
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer 1e-7 -1.675e+01 0.0000 516.0 10.63% 7645.1 8.43% motif file (matrix) svg 85
C
A
T
G
A
C
T
G
C
T
A
G
T
C
G
A
T
C
G
A
T
C
G
A
T
C
G
A
T
C
A
G
T
C
A
G
T
C
A
G
T
G
A
C
T
G
A
C
C
G
T
A
A
C
T
G
T
G
C
A
C
G
A
T
A
C
T
G
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer 1e-7 -1.636e+01 0.0000 242.0 4.99% 3184.0 3.51% motif file (matrix) svg 86
G
A
C
T
T
C
G
A
C
G
A
T
T
A
C
G
C
T
A
G
T
A
C
G
A
C
T
G
A
T
G
C
G
T
A
C
G
T
A
C
Zac1(Zf)/Neuro2A-Plagl1-ChIP-Seq(GSE75942)/Homer 1e-7 -1.635e+01 0.0000 1665.0 34.31% 27933.9 30.79% motif file (matrix) svg 87
A
T
G
C
C
T
G
A
A
T
C
G
T
A
C
G
A
G
T
C
C
G
A
T
T
C
A
G
C
G
A
T
C
T
A
G
A
G
C
T
G
T
C
A
G
T
C
A
C
G
T
A
A
G
T
C
C
G
T
A
T
A
C
G
C
T
G
A
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer 1e-7 -1.626e+01 0.0000 493.0 10.16% 7290.3 8.04% motif file (matrix) svg 88
T
G
A
C
G
C
T
A
T
G
A
C
C
G
T
A
T
C
A
G
G
A
T
C
C
G
T
A
C
A
T
G
C
A
T
G
C
T
A
G
C
T
A
G
C
T
A
G
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer 1e-7 -1.613e+01 0.0000 377.0 7.77% 5370.1 5.92% motif file (matrix) svg 89
T
A
C
G
A
T
C
G
T
A
G
C
G
A
T
C
A
C
T
G
A
C
G
T
A
G
T
C
A
C
G
T
C
T
A
G
A
T
C
G
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer 1e-6 -1.612e+01 0.0000 955.0 19.68% 15258.8 16.82% motif file (matrix) svg 90
T
C
A
G
A
G
C
T
G
T
A
C
C
G
T
A
A
C
G
T
C
G
T
A
C
G
T
A
C
G
T
A
G
C
T
A
G
A
C
T
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer 1e-6 -1.610e+01 0.0000 365.0 7.52% 5175.2 5.70% motif file (matrix) svg 91
G
A
C
T
C
A
G
T
A
G
C
T
C
G
A
T
A
G
T
C
G
A
T
C
A
G
T
C
C
G
T
A
A
T
G
C
T
C
A
G
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer 1e-6 -1.583e+01 0.0000 879.0 18.11% 13951.3 15.38% motif file (matrix) svg 92
A
G
T
C
C
T
A
G
C
T
A
G
A
G
T
C
G
A
T
C
G
T
A
C
A
G
T
C
C
T
A
G
A
G
T
C
A
G
T
C
A
G
T
C
G
T
A
C
Sp2(Zf)/HEK293-Sp2.eGFP-ChIP-Seq(Encode)/Homer 1e-6 -1.526e+01 0.0000 1164.0 23.99% 19036.8 20.98% motif file (matrix) svg 93
T
A
C
G
T
A
G
C
G
C
T
A
C
G
A
T
C
T
A
G
A
C
G
T
C
A
G
T
C
A
G
T
G
C
T
A
A
G
T
C
G
T
C
A
G
C
A
T
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer 1e-6 -1.493e+01 0.0000 311.0 6.41% 4355.9 4.80% motif file (matrix) svg 94
T
A
G
C
G
C
A
T
A
G
T
C
G
A
T
C
A
T
G
C
G
A
C
T
C
T
A
G
A
C
T
G
A
C
T
G
C
T
G
A
A
C
T
G
C
T
A
G
A
G
T
C
T
G
A
C
C
G
A
T
GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer 1e-6 -1.485e+01 0.0000 955.0 19.68% 15373.3 16.95% motif file (matrix) svg 95
G
A
T
C
G
T
A
C
C
G
T
A
A
G
C
T
G
A
C
T
G
C
T
A
C
T
G
A
A
C
G
T
G
A
T
C
G
C
T
A
Hoxc6(Homeobox)/EB-Hoxc6.iFlag-ChIP-Seq(GSE142377)/Homer 1e-6 -1.482e+01 0.0000 1291.0 26.60% 21350.2 23.53% motif file (matrix) svg 96
C
T
A
G
C
A
G
T
T
G
A
C
C
G
T
A
G
A
T
C
T
C
A
G
G
A
C
T
C
A
T
G
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer 1e-6 -1.478e+01 0.0000 932.0 19.20% 14975.7 16.51% motif file (matrix) svg 97
G
T
A
C
G
A
T
C
C
A
G
T
A
G
T
C
A
G
T
C
A
G
T
C
T
G
C
A
G
A
T
C
C
T
G
A
A
T
G
C
G
T
C
A
A
C
G
T
WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer 1e-6 -1.463e+01 0.0000 495.0 10.20% 7430.6 8.19% motif file (matrix) svg 98
G
A
C
T
C
T
A
G
C
T
A
G
C
T
A
G
A
C
T
G
T
C
G
A
C
T
G
A
C
T
A
G
C
T
A
G
C
T
A
G
G
T
A
C
G
T
C
A
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer 1e-6 -1.462e+01 0.0000 748.0 15.41% 11771.9 12.98% motif file (matrix) svg 99
T
C
G
A
T
G
A
C
A
G
T
C
C
G
T
A
A
G
T
C
C
T
A
G
A
C
G
T
A
C
T
G
A
C
T
G
A
G
C
T
A
G
T
C
G
C
A
T
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer 1e-6 -1.461e+01 0.0000 408.0 8.41% 5971.3 6.58% motif file (matrix) svg 100
C
G
A
T
C
T
A
G
T
C
G
A
A
G
C
T
C
G
A
T
C
T
G
A
C
G
T
A
A
G
C
T
A
C
T
G
C
T
A
G
A
T
G
C
G
A
T
C
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer 1e-6 -1.435e+01 0.0000 107.0 2.20% 1202.8 1.33% motif file (matrix) svg 101
A
G
C
T
A
G
T
C
A
G
T
C
A
C
G
T
C
T
A
G
C
G
T
A
A
C
G
T
A
G
C
T
C
T
G
A
T
A
C
G
Lhx6/Neurons-Lhx6-ChIP-seq(GSE85704)/Homer 1e-6 -1.383e+01 0.0000 644.0 13.27% 10035.8 11.06% motif file (matrix) svg 102
G
A
C
T
A
G
C
T
G
T
A
C
G
A
C
T
C
T
G
A
A
C
T
G
G
T
C
A
C
T
G
A
A
T
G
C
T
A
C
G
G
A
C
T
A
C
G
T
A
G
T
C
G
A
C
T
C
T
G
A
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer 1e-5 -1.363e+01 0.0000 134.0 2.76% 1621.0 1.79% motif file (matrix) svg 103
T
G
C
A
T
C
G
A
T
C
G
A
A
C
G
T
C
A
T
G
C
G
T
A
A
G
T
C
T
C
A
G
A
C
G
T
G
T
A
C
C
G
T
A
A
G
C
T
CREB5(bZIP)/LNCaP-CREB5.V5-ChIP-Seq(GSE137775)/Homer 1e-5 -1.331e+01 0.0000 159.0 3.28% 2012.4 2.22% motif file (matrix) svg 104
T
C
G
A
A
C
G
T
A
C
T
G
C
T
G
A
A
G
T
C
T
C
A
G
A
G
C
T
G
T
A
C
C
G
T
A
A
G
C
T
G
A
T
C
T
C
G
A
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer 1e-5 -1.291e+01 0.0000 55.0 1.13% 515.2 0.57% motif file (matrix) svg 105
C
T
A
G
T
A
C
G
G
A
T
C
G
T
C
A
T
G
C
A
A
C
G
T
T
G
C
A
G
C
T
A
T
C
G
A
T
G
C
A
Hoxa9(Homeobox)/ChickenMSG-Hoxa9.Flag-ChIP-Seq(GSE86088)/Homer 1e-5 -1.256e+01 0.0000 1299.0 26.77% 21745.4 23.97% motif file (matrix) svg 106
G
C
T
A
C
T
G
A
T
C
G
A
A
G
T
C
A
G
T
C
C
T
G
A
A
G
T
C
G
T
C
A
C
T
G
A
T
G
C
A
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer 1e-5 -1.254e+01 0.0000 569.0 11.72% 8846.7 9.75% motif file (matrix) svg 107
C
T
G
A
C
T
A
G
C
A
T
G
C
T
A
G
A
C
T
G
A
C
T
G
G
A
T
C
A
C
T
G
A
C
T
G
C
T
A
G
T
C
A
G
A
G
T
C
Klf15(Zf)/Liver-Klf15-ChIP-Seq(GSE166083)/Homer 1e-5 -1.189e+01 0.0000 841.0 17.33% 13649.7 15.05% motif file (matrix) svg 108
T
A
G
C
G
C
T
A
T
C
G
A
C
T
G
A
A
G
T
C
A
G
T
C
C
T
G
A
A
G
T
C
C
G
T
A
C
T
A
G
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer 1e-5 -1.176e+01 0.0000 402.0 8.28% 6055.9 6.68% motif file (matrix) svg 109
A
T
G
C
T
C
A
G
T
C
G
A
G
C
A
T
A
C
T
G
C
G
T
A
A
G
T
C
T
C
A
G
G
A
C
T
T
G
A
C
C
G
T
A
A
G
C
T
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer 1e-5 -1.162e+01 0.0000 153.0 3.15% 1984.3 2.19% motif file (matrix) svg 110
T
C
G
A
T
G
C
A
A
C
T
G
G
T
C
A
A
G
T
C
A
G
T
C
A
G
T
C
A
G
T
C
A
G
C
T
T
G
A
C
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer 1e-4 -1.148e+01 0.0000 999.0 20.59% 16494.1 18.18% motif file (matrix) svg 111
T
G
C
A
C
G
T
A
G
T
C
A
A
G
C
T
A
G
T
C
G
C
T
A
T
A
G
C
C
G
A
T
C
T
A
G
G
A
T
C
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer 1e-4 -1.052e+01 0.0001 332.0 6.84% 4961.0 5.47% motif file (matrix) svg 112
C
G
T
A
C
A
T
G
C
A
T
G
A
C
T
G
C
T
A
G
T
C
G
A
G
C
A
T
C
G
A
T
A
G
C
T
A
G
T
C
G
A
T
C
G
T
A
C
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer 1e-4 -1.039e+01 0.0001 308.0 6.35% 4566.9 5.03% motif file (matrix) svg 113
T
C
G
A
G
C
A
T
A
C
T
G
C
T
G
A
A
G
T
C
T
C
A
G
G
A
C
T
G
T
A
C
C
G
T
A
A
G
C
T
A
G
T
C
G
A
T
C
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer 1e-4 -1.022e+01 0.0002 134.0 2.76% 1744.1 1.92% motif file (matrix) svg 114
T
A
C
G
T
A
C
G
G
T
A
C
A
T
C
G
A
C
T
G
T
A
C
G
T
C
G
A
C
T
G
A
T
C
G
A
A
T
C
G
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer 1e-4 -1.013e+01 0.0002 356.0 7.34% 5392.5 5.94% motif file (matrix) svg 115
T
C
G
A
A
G
C
T
A
C
G
T
A
C
G
T
A
G
T
C
A
G
T
C
A
C
G
T
A
T
C
G
G
A
C
T
A
T
C
G
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer 1e-4 -1.012e+01 0.0002 392.0 8.08% 6004.5 6.62% motif file (matrix) svg 116
C
G
T
A
C
T
G
A
A
C
T
G
A
G
C
T
A
G
T
C
G
A
T
C
G
A
T
C
G
C
A
T
C
T
G
A
C
T
A
G
C
T
A
G
T
A
C
G
T
C
G
A
T
G
C
A
G
C
A
T
EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer 1e-4 -9.920e+00 0.0002 576.0 11.87% 9193.4 10.13% motif file (matrix) svg 117
T
G
A
C
G
C
T
A
T
C
G
A
T
G
C
A
A
G
T
C
A
G
T
C
C
G
T
A
A
G
T
C
C
G
T
A
C
T
G
A
G
C
T
A
G
T
A
C
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer 1e-4 -9.784e+00 0.0002 440.0 9.07% 6851.7 7.55% motif file (matrix) svg 118
T
C
G
A
C
T
G
A
C
T
G
A
A
T
G
C
G
T
A
C
G
T
C
A
A
G
C
T
A
G
C
T
C
G
T
A
T
C
A
G
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer 1e-4 -9.550e+00 0.0003 228.0 4.70% 3289.6 3.63% motif file (matrix) svg 119
A
G
T
C
G
A
C
T
C
A
G
T
G
T
A
C
A
G
T
C
A
T
C
G
T
C
A
G
A
C
T
G
G
T
C
A
C
G
T
A
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer 1e-4 -9.533e+00 0.0003 299.0 6.16% 4472.9 4.93% motif file (matrix) svg 120
C
T
A
G
A
T
C
G
G
A
C
T
A
G
T
C
A
G
T
C
A
G
T
C
G
A
C
T
C
T
G
A
A
C
T
G
C
T
A
G
A
C
T
G
C
T
G
A
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer 1e-4 -9.504e+00 0.0003 156.0 3.21% 2122.8 2.34% motif file (matrix) svg 121
C
T
A
G
T
C
G
A
A
C
G
T
A
C
T
G
C
G
T
A
A
T
G
C
A
C
G
T
G
T
A
C
C
G
T
A
A
G
C
T
G
A
T
C
G
T
A
C
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer 1e-4 -9.393e+00 0.0003 265.0 5.46% 3912.7 4.31% motif file (matrix) svg 122
C
G
A
T
C
T
G
A
C
G
T
A
C
A
G
T
A
G
T
C
G
A
T
C
G
A
T
C
A
C
T
G
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer 1e-4 -9.227e+00 0.0004 2186.0 45.04% 38452.4 42.39% motif file (matrix) svg 123
C
A
G
T
T
G
C
A
A
C
G
T
A
C
T
G
C
G
T
A
A
T
C
G
C
G
A
T
T
G
A
C
C
G
T
A
A
C
G
T
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer 1e-3 -9.210e+00 0.0004 264.0 5.44% 3907.5 4.31% motif file (matrix) svg 124
C
T
G
A
A
C
G
T
A
C
G
T
A
C
G
T
A
G
T
C
G
A
C
T
C
G
A
T
C
T
G
A
A
C
T
G
C
G
T
A
C
G
T
A
T
C
G
A
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer 1e-3 -8.769e+00 0.0006 190.0 3.92% 2709.1 2.99% motif file (matrix) svg 125
G
A
C
T
C
A
G
T
G
A
T
C
G
A
T
C
A
C
G
T
G
A
T
C
C
T
G
A
T
A
C
G
C
G
T
A
G
T
C
A
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer 1e-3 -8.769e+00 0.0006 277.0 5.71% 4154.9 4.58% motif file (matrix) svg 126
T
C
G
A
A
C
G
T
C
A
T
G
G
C
T
A
T
A
G
C
C
G
A
T
G
T
A
C
G
C
T
A
A
C
G
T
A
T
G
C
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer 1e-3 -8.617e+00 0.0007 296.0 6.10% 4485.2 4.94% motif file (matrix) svg 127
A
C
T
G
C
T
A
G
T
C
G
A
C
G
A
T
C
A
T
G
G
C
T
A
A
T
C
G
C
G
A
T
G
T
A
C
G
C
T
A
A
G
C
T
G
T
A
C
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer 1e-3 -8.485e+00 0.0008 220.0 4.53% 3220.1 3.55% motif file (matrix) svg 128
A
C
T
G
C
A
T
G
T
C
G
A
A
C
G
T
A
C
T
G
C
G
T
A
A
T
C
G
A
C
G
T
G
T
A
C
C
G
T
A
G
A
C
T
A
G
T
C
Fos(bZIP)/TSC-Fos-ChIP-Seq(GSE110950)/Homer 1e-3 -8.282e+00 0.0009 230.0 4.74% 3399.3 3.75% motif file (matrix) svg 129
C
T
A
G
T
C
G
A
G
C
A
T
C
A
T
G
G
C
T
A
T
A
G
C
C
G
A
T
G
T
A
C
C
T
G
A
A
G
C
T
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer 1e-3 -8.202e+00 0.0010 216.0 4.45% 3171.8 3.50% motif file (matrix) svg 130
C
T
A
G
C
T
A
G
A
T
G
C
G
T
A
C
T
C
A
G
A
T
G
C
A
G
T
C
G
C
A
T
G
A
T
C
G
A
T
C
ZNF91(Zf)/HEK-ZNF91.HA-ChIP-Seq(GSE162571)/Homer 1e-3 -8.113e+00 0.0011 550.0 11.33% 8915.5 9.83% motif file (matrix) svg 131
T
A
C
G
G
A
C
T
A
C
T
G
A
C
T
G
C
T
A
G
A
T
G
C
A
G
T
C
A
G
T
C
A
G
T
C
C
T
G
A
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer 1e-3 -8.070e+00 0.0011 97.0 2.00% 1254.0 1.38% motif file (matrix) svg 132
A
T
G
C
C
T
G
A
G
A
C
T
A
C
G
T
A
C
G
T
G
T
A
C
G
A
T
C
C
G
A
T
C
T
A
G
C
A
T
G
C
G
T
A
C
G
T
A
C
T
G
A
G
A
C
T
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer 1e-3 -7.828e+00 0.0014 160.0 3.30% 2270.8 2.50% motif file (matrix) svg 133
T
G
C
A
C
T
A
G
C
T
A
G
C
T
G
A
C
A
T
G
A
C
T
G
T
G
C
A
G
A
T
C
G
T
C
A
T
G
C
A
G
T
C
A
G
T
C
A
A
G
C
T
C
T
A
G
G
C
A
T
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer 1e-3 -7.706e+00 0.0016 78.0 1.61% 974.1 1.07% motif file (matrix) svg 134
C
A
T
G
T
A
C
G
T
A
G
C
G
A
T
C
G
A
T
C
A
T
G
C
G
T
A
C
G
A
C
T
T
C
A
G
A
T
G
C
C
G
A
T
A
T
C
G
C
A
G
T
A
C
T
G
G
T
A
C
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer 1e-3 -7.415e+00 0.0021 368.0 7.58% 5812.2 6.41% motif file (matrix) svg 135
T
C
G
A
A
C
G
T
A
C
G
T
C
T
G
A
G
A
T
C
T
C
A
G
G
A
C
T
G
T
C
A
C
G
T
A
A
G
C
T
G
T
C
A
C
T
A
G
A
G
C
T
A
C
G
T
T
C
G
A
NFIL3(bZIP)/HepG2-NFIL3-ChIP-Seq(Encode)/Homer 1e-3 -7.357e+00 0.0022 232.0 4.78% 3494.5 3.85% motif file (matrix) svg 136
A
T
G
C
G
A
C
T
A
C
T
G
C
A
G
T
G
A
T
C
A
C
G
T
T
A
C
G
T
A
C
G
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer 1e-3 -7.179e+00 0.0026 937.0 19.31% 15918.3 17.55% motif file (matrix) svg 137
C
G
A
T
T
A
C
G
G
A
T
C
G
C
T
A
T
C
A
G
G
A
C
T
C
G
A
T
G
T
A
C
G
A
T
C
G
T
C
A
T
C
G
A
T
G
A
C
C
G
T
A
C
T
A
G
G
A
C
T
C
T
A
G
C
T
A
G
G
T
A
C
A
G
T
C
C
G
T
A
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer 1e-3 -7.030e+00 0.0031 17.0 0.35% 130.0 0.14% motif file (matrix) svg 138
C
A
G
T
G
A
C
T
C
G
T
A
G
C
T
A
G
T
A
C
G
A
T
C
G
T
A
C
G
A
C
T
A
G
C
T
A
C
G
T
T
G
A
C
C
G
T
A
C
A
G
T
A
C
G
T
A
T
G
C
ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer 1e-3 -6.968e+00 0.0032 124.0 2.56% 1730.3 1.91% motif file (matrix) svg 139
T
A
C
G
G
A
C
T
T
G
A
C
C
G
T
A
A
C
G
T
G
A
T
C
G
T
C
A
C
G
T
A
A
C
G
T
A
T
G
C
C
G
T
A
G
A
C
T
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer 1e-2 -6.766e+00 0.0039 54.0 1.11% 643.1 0.71% motif file (matrix) svg 140
G
A
C
T
A
G
T
C
C
G
A
T
A
C
T
G
C
T
G
A
T
G
A
C
G
T
A
C
C
G
T
A
A
T
C
G
G
C
A
T
C
T
G
A
C
T
A
G
Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer 1e-2 -6.743e+00 0.0040 367.0 7.56% 5856.3 6.46% motif file (matrix) svg 141
C
G
A
T
C
T
A
G
A
C
G
T
G
T
C
A
C
G
T
A
C
G
T
A
A
G
T
C
C
G
T
A
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer 1e-2 -6.474e+00 0.0052 314.0 6.47% 4963.9 5.47% motif file (matrix) svg 142
C
A
T
G
C
T
A
G
T
C
G
A
A
C
G
T
A
C
T
G
C
G
T
A
T
A
G
C
C
G
A
T
T
G
A
C
C
G
T
A
A
G
C
T
G
A
T
C
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer 1e-2 -6.425e+00 0.0054 184.0 3.79% 2751.2 3.03% motif file (matrix) svg 143
T
C
A
G
C
T
A
G
C
T
A
G
A
C
T
G
A
C
T
G
G
A
T
C
A
C
T
G
A
C
T
G
C
T
A
G
C
T
A
G
A
G
T
C
G
A
T
C
KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer 1e-2 -6.285e+00 0.0062 684.0 14.09% 11503.1 12.68% motif file (matrix) svg 144
A
T
G
C
A
G
T
C
A
G
C
T
A
G
C
T
A
C
G
T
A
T
C
G
C
G
T
A
C
G
A
T
T
A
G
C
G
A
C
T
LEF1(HMG)/H1-LEF1-ChIP-Seq(GSE64758)/Homer 1e-2 -6.186e+00 0.0067 343.0 7.07% 5492.3 6.05% motif file (matrix) svg 145
C
T
A
G
C
A
T
G
C
A
T
G
T
A
C
G
A
G
T
C
G
C
A
T
A
G
C
T
C
T
A
G
A
C
G
T
A
G
T
C
G
A
C
T
A
C
T
G
A
C
T
G
A
C
T
G
T
C
G
A
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer 1e-2 -6.164e+00 0.0068 140.0 2.88% 2035.2 2.24% motif file (matrix) svg 146
G
C
T
A
T
A
G
C
A
G
C
T
A
T
C
G
G
T
C
A
C
G
T
A
G
C
T
A
A
T
G
C
G
A
T
C
C
T
G
A
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer 1e-2 -6.104e+00 0.0072 210.0 4.33% 3212.1 3.54% motif file (matrix) svg 147
C
T
A
G
T
C
G
A
A
C
G
T
A
C
T
G
C
G
T
A
T
A
G
C
C
G
A
T
G
T
A
C
C
G
T
A
A
G
C
T
G
A
T
C
G
T
A
C
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer 1e-2 -5.855e+00 0.0092 96.0 1.98% 1333.4 1.47% motif file (matrix) svg 148
A
G
T
C
G
C
A
T
C
G
T
A
C
G
T
A
G
T
A
C
A
C
G
T
A
C
T
G
G
A
T
C
G
A
T
C
T
C
G
A
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer 1e-2 -5.811e+00 0.0096 751.0 15.47% 12770.4 14.08% motif file (matrix) svg 149
A
T
G
C
G
A
C
T
A
C
G
T
C
T
A
G
A
C
G
T
A
C
G
T
A
C
G
T
C
T
G
A
G
A
T
C
G
C
T
A
A
G
C
T
C
G
T
A
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer 1e-2 -5.764e+00 0.0099 340.0 7.01% 5481.4 6.04% motif file (matrix) svg 150
C
T
G
A
A
G
C
T
A
C
G
T
A
C
G
T
A
G
T
C
G
A
C
T
G
A
C
T
C
T
G
A
C
T
G
A
C
T
A
G
C
G
T
A
C
G
T
A
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer 1e-2 -5.758e+00 0.0099 257.0 5.30% 4043.5 4.46% motif file (matrix) svg 151
A
T
C
G
T
G
A
C
A
T
G
C
C
T
G
A
T
C
A
G
G
A
C
T
A
G
T
C
C
G
A
T
T
C
A
G
T
C
G
A
C
A
T
G
C
T
A
G
C
T
A
G
C
G
T
A
C
T
A
G
C
T
A
G
C
T
G
A
C
T
A
G
C
T
A
G
A
T
G
C
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer 1e-2 -5.743e+00 0.0100 57.0 1.17% 722.9 0.80% motif file (matrix) svg 152
C
A
T
G
A
C
G
T
A
G
T
C
G
A
T
C
G
A
T
C
G
A
T
C
G
C
T
A
C
T
A
G
C
T
A
G
C
T
A
G
T
C
A
G
T
C
G
A
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer 1e-2 -5.648e+00 0.0109 672.0 13.85% 11376.8 12.54% motif file (matrix) svg 153
C
A
G
T
T
C
A
G
A
G
C
T
G
A
C
T
A
C
G
T
A
G
T
C
G
A
T
C
G
A
C
T
C
T
G
A
A
C
T
G
G
A
T
C
C
G
T
A
C
T
G
A
A
G
T
C
G
T
A
C
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer 1e-2 -5.541e+00 0.0121 592.0 12.20% 9960.5 10.98% motif file (matrix) svg 154
A
T
C
G
A
T
C
G
A
T
G
C
A
G
C
T
G
C
T
A
A
C
G
T
C
G
T
A
C
G
T
A
C
T
G
A
C
T
G
A
C
T
A
G
T
A
C
G
TATA-Box(TBP)/Promoter/Homer 1e-2 -5.278e+00 0.0156 646.0 13.31% 10963.5 12.09% motif file (matrix) svg 155
T
A
G
C
T
C
A
G
C
A
T
G
G
C
A
T
A
G
C
T
C
G
A
T
A
T
G
C
C
G
T
A
C
G
T
A
G
T
C
A
CHR(?)/Hela-CellCycle-Expression/Homer 1e-2 -5.039e+00 0.0197 284.0 5.85% 4577.3 5.05% motif file (matrix) svg 156
C
G
T
A
C
G
A
T
C
T
A
G
C
G
T
A
A
G
C
T
C
A
G
T
T
A
C
G
C
G
T
A
A
C
G
T
C
A
T
G
C
T
A
G
A
T
G
C
HOXA3(Homeobox)/mEmbryo-Hoxa3-ChIP-Seq(E-MTAB-8607)/Homer 1e-2 -5.034e+00 0.0197 63.0 1.30% 843.7 0.93% motif file (matrix) svg 157
T
A
C
G
C
T
G
A
T
C
G
A
C
G
A
T
C
T
A
G
C
T
A
G
T
C
G
A
C
T
G
A
T
C
G
A
T
C
G
A
C
G
T
A
T
C
G
A
G
C
A
T
C
A
T
G
C
G
T
A
T
A
C
G
G
C
A
T
T
G
A
C
C
G
T
A
A
G
C
T
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer 1e-2 -4.920e+00 0.0219 83.0 1.71% 1169.3 1.29% motif file (matrix) svg 158
C
T
G
A
T
A
C
G
G
C
A
T
A
G
C
T
A
G
C
T
A
G
T
C
T
C
G
A
A
C
T
G
C
A
G
T
A
G
C
T
A
G
C
T
G
A
T
C
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer 1e-2 -4.906e+00 0.0221 178.0 3.67% 2759.6 3.04% motif file (matrix) svg 159
G
T
A
C
C
A
G
T
A
C
T
G
A
C
T
G
A
C
T
G
G
A
T
C
A
C
T
G
A
C
G
T
A
C
T
G
A
C
T
G
A
G
T
C
G
A
T
C
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer 1e-2 -4.850e+00 0.0232 740.0 15.25% 12720.3 14.02% motif file (matrix) svg 160
A
G
C
T
A
G
T
C
A
G
T
C
A
C
G
T
C
T
A
G
A
C
G
T
A
C
G
T
A
C
G
T
C
G
T
A
A
G
T
C
G
A
T
C
C
G
T
A
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer 1e-2 -4.822e+00 0.0238 190.0 3.92% 2971.9 3.28% motif file (matrix) svg 161
C
A
T
G
C
T
A
G
A
G
C
T
G
A
C
T
C
A
T
G
A
G
T
C
G
A
T
C
G
C
T
A
C
G
A
T
C
T
A
G
T
C
A
G
G
T
A
C
C
T
G
A
T
C
G
A
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer 1e-2 -4.779e+00 0.0246 62.0 1.28% 838.5 0.92% motif file (matrix) svg 162
C
G
T
A
A
T
G
C
C
G
A
T
A
C
G
T
A
G
T
C
C
G
T
A
C
G
T
A
C
G
T
A
C
T
A
G
A
T
C
G
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer 1e-2 -4.768e+00 0.0248 49.0 1.01% 634.7 0.70% motif file (matrix) svg 163
A
C
T
G
C
A
T
G
G
C
T
A
T
C
G
A
G
C
T
A
A
G
C
T
A
G
C
T
G
T
A
C
A
G
T
C
T
G
A
C
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer 1e-2 -4.704e+00 0.0262 41.0 0.84% 513.6 0.57% motif file (matrix) svg 164
T
C
G
A
T
A
G
C
G
T
C
A
A
C
T
G
A
C
T
G
C
G
T
A
C
G
T
A
C
T
A
G
A
G
C
T
T
C
A
G
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer 1e-2 -4.703e+00 0.0262 889.0 18.32% 15443.9 17.02% motif file (matrix) svg 165
C
G
A
T
C
T
A
G
A
C
G
T
A
C
G
T
A
C
G
T
C
G
T
A
A
G
C
T
C
G
A
T
A
G
C
T
C
G
T
A
C
T
A
G
T
A
G
C
FoxD3(forkhead)/ZebrafishEmbryo-Foxd3.biotin-ChIP-seq(GSE106676)/Homer 1e-2 -4.670e+00 0.0268 439.0 9.05% 7350.2 8.10% motif file (matrix) svg
