Information for 3-AAAAATACTR (Motif 3)

C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
Reverse Opposite:
G A T C C T G A A T C G C G A T G C T A A C G T G C A T C A G T A G C T G A C T
p-value:1e-85
log p-value:-1.961e+02
Information Content per bp:1.712
Number of Target Sequences with motif1645.0
Percentage of Target Sequences with motif72.66%
Number of Background Sequences with motif12654.4
Percentage of Background Sequences with motif52.50%
Average Position of motif in Targets236.7 +/- 232.7bp
Average Position of motif in Background105.4 +/- 76.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.90
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown4/Drosophila-Promoters/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:AAAAATACTR--
AAAAATACCRMA
 C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G A C G T A C G T
C T G A C G T A C G T A G C T A C T G A A C G T G T C A A G T C A G T C C T G A G T C A G C T A

pan/dmmpmm(Down)/fly

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAAAATACTR
AAAAACA---
 C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
G T C A G T C A T G C A G T C A G T C A A G T C G C T A A C G T A C G T A C G T

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--AAAAATACTR
CTAAAAATAA--
 A C G T A C G T C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
A G T C A G C T C G T A C G T A C G T A C G T A C G T A A C G T C G T A T C G A A C G T A C G T

dl/dmmpmm(Down)/fly

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATACTR
GGAAAATCCA-
 A C G T C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
T C A G T C A G T C G A G T C A C G T A C G T A A G C T G T A C T A G C T C G A A C G T

dl/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATACTR
GGAAAATCC--
 A C G T C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
C T A G C T A G C T G A G T C A G C T A C G T A A G C T G T A C T G A C A C G T A C G T

br-Z2/dmmpmm(Down)/fly

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAAAATACTR
ATTAATA---
 C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
G C T A G C A T G C A T G T C A T G C A G C A T G C T A A C G T A C G T A C G T

bin/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAAAATACTR
ATAAATA---
 C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
C T A G A C G T C G T A C G T A C G T A A C G T C G T A A C G T A C G T A C G T

sd/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.66
Offset:0
Orientation:forward strand
Alignment:AAAAATACTR
ANAAATNCA-
 C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
C G T A A C G T C G T A G T A C C G T A A C G T A C G T A G C T C G A T A C G T

POL007.1_BREd/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAAAATACTR
-NANANAC--
 C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
A C G T T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T A C G T

br(var.2)/MA0011.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAAAATACTR
--AAATAGTA
 C T G A T C G A G T C A C G T A T G C A C A G T C G T A A T G C G A C T C T A G
A C G T A C G T C T G A G C T A G T C A A C G T C T G A C T A G C G A T C G T A