Information for 14-CGCGCTACTGAA (Motif 20)

A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C T G A C G T C G T A A C T G A G T C A C T G A G T C A C T G
p-value:1e-6
log p-value:-1.508e+01
Information Content per bp:1.530
Number of Target Sequences with motif2253.0
Percentage of Target Sequences with motif99.51%
Number of Background Sequences with motif23701.5
Percentage of Background Sequences with motif98.34%
Average Position of motif in Targets252.6 +/- 241.1bp
Average Position of motif in Background104.8 +/- 74.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)3.63
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Initiator/Drosophila-Promoters/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGCGCTACTGAA
----CRACTGAN
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A
A C G T A C G T A C G T A C G T T G A C C T A G C T G A G A T C A G C T A T C G T G C A C G T A

odd/MA0454.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGCGCTACTGAA
-CTGCTACTGTT
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A
A C G T A G T C A C G T A C T G A G T C A C G T C G T A A G T C A G C T A T C G A C G T C A G T

odd/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGCGCTACTGAA
--TGCTACTGTT
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A
A C G T A C G T A C G T A C T G G T A C C G A T G C T A A G T C A G C T T C A G A C G T C A G T

BEAF-32B/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGCGCTACTGAA
-ACGATACT---
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A
A C G T C T A G A G T C A C T G C G T A A C G T C G T A A G C T A C G T A C G T A C G T A C G T

Scr/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGCGCTACTGAA
--CGTTAATGAC
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A
A C G T A C G T G A T C T C A G G A C T A C G T C G T A C G T A A C G T A C T G C T G A A G T C

Scr/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCGCTACTGAA
--CNTTAATGAC
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A
A C G T A C G T G A T C T C A G G A C T A C G T T C G A T G C A C A G T A C T G C T G A A G T C

zen/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGCGCTACTGAA
--CCCTAATGAA
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A
A C G T A C G T A G T C A T G C G A T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T

zen/MA0256.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGCGCTACTGAA
----CTAATGA-
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A
A C G T A C G T A C G T A C G T G A T C A C G T C G T A C G T A A C G T A C T G C G T A A C G T

bap/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CGCGCTACTGAA--
----NCACTTAANN
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G T A A G T C A C G T A C G T C G T A G T C A T C A G C G T A

ftz/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CGCGCTACTGAA--
-NNGTTAATGACCN
 A G T C A C T G A G T C A C T G A G T C A C G T C G T A A G T C A C G T A C T G C G T A C G T A A C G T A C G T
A C G T T C A G T A G C T C A G A G C T A C G T C G T A C G T A A G C T A C T G C T G A A T G C G T A C A C G T