Information for 1-CGGTCACACT (Motif 1)

A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T
Reverse Opposite:
C T G A T A C G G C A T C T A G C A G T C A T G C T G A G A T C A G T C C T A G
p-value:1e-101
log p-value:-2.327e+02
Information Content per bp:1.865
Number of Target Sequences with motif1195.0
Percentage of Target Sequences with motif52.78%
Number of Background Sequences with motif7486.9
Percentage of Background Sequences with motif31.06%
Average Position of motif in Targets232.8 +/- 229.2bp
Average Position of motif in Background105.0 +/- 71.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.58
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-CGGTCACACT-
ACGGTCACACTG
 A C G T A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T A C G T
T C G A A G T C T C A G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T C T A G

M1BP/MA1459.1/Jaspar

Match Rank:2
Score:0.96
Offset:-4
Orientation:forward strand
Alignment:----CGGTCACACT----
GATACGGTCACACTGCTC
 A C G T A C G T A C G T A C G T A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T A C G T A C G T A C G T A C G T
T A C G T G C A G C A T T G C A A G T C C T A G C A T G A G C T G T A C G C T A A G T C C G T A A G T C G A C T C T A G G T A C G A C T G T A C

Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer

Match Rank:3
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-CGGTCACACT-
MYGGTCACACTG
 A C G T A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T A C G T
T G C A A G T C C T A G A C T G A G C T G T A C T C G A A G T C C G T A A G T C G A C T C T A G

prd/dmmpmm(Noyes)/fly

Match Rank:4
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGGTCACACT
AATCCGTCACGCT
 A C G T A C G T A C G T A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T
T G C A G C T A A G C T A G T C T G A C A C T G C G A T A G T C G T C A A G T C C T A G A T G C G A C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGTCACACT
AGGTCA----
 A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

Hr46/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGGTCACACT
GGGTCA----
 A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T
A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

usp/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGGTCACACT
GGGGTCACG--
 A C G T A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T
T A C G C T A G A C T G A C T G A C G T A G T C C T G A G A T C T A C G A C G T A C G T

usp/MA0016.1/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGGTCACACT
GGGGTCACGG-
 A C G T A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T
A T C G C A T G A C T G A C T G A C G T A G T C C T G A G A T C T A C G A T C G A C G T

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGGTCACACT
NCTGTCANAG-
 A C G T A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T
A T C G G T A C A G C T A C T G A C G T A G T C C G T A G T A C G T C A C A T G A C G T

prd-PD/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGGTCACACT-----
TNTCGTCACGGTTGACA
 A C G T A C G T A G T C A C T G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A T G C A C T G A C G T A G T C C G T A A G T C A C T G A T C G A C G T A G C T A T C G C T G A A G T C T G C A