Information for 3-GTCCGGAGCACC (Motif 3)

C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C
Reverse Opposite:
A C T G A T C G G C A T A T C G T A G C C G A T A T G C G T A C C T A G T A C G T C G A G T A C
p-value:1e-48
log p-value:-1.121e+02
Information Content per bp:1.487
Number of Target Sequences with motif911.0
Percentage of Target Sequences with motif59.74%
Number of Background Sequences with motif9984.0
Percentage of Background Sequences with motif40.95%
Average Position of motif in Targets258.9 +/- 246.5bp
Average Position of motif in Background105.0 +/- 69.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.76
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GTCCGGAGCACC
---CGGAGC---
 C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C
A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GTCCGGAGCACC
-----CAGCC--
 C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

kni/dmmpmm(Noyes)/fly

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GTCCGGAGCACC
AAACTAGAGCAC-
 A C G T C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C
C G T A T C G A C G T A A G T C A G C T T C G A A C T G C T G A A C T G A G T C C T G A T A G C A C G T

grh/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GTCCGGAGCACC------
--CCGCAAAACCAGTTNA
 C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G T C A G T C A C T G A G T C C G T A C T A G C T A G C G T A A G T C A G T C C T A G A C T G A C G T A C G T A C G T C T A G

kni/MA0451.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTCCGGAGCACC
AAACTAGAGCAC-
 A C G T C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C
C G T A G T C A C G T A A G T C A G C T C T G A A C T G C T G A A C T G A G T C C T G A T A G C A C G T

ttk/dmmpmm(Papatsenko)/fly

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTCCGGAGCACC
---GCCAGGACC
 C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C
A C G T A C G T A C G T T A C G A T C G T G A C C T G A A C T G A C T G C G T A A G T C G T A C

Adf1/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GTCCGGAGCACC
NACAGAAGCAGC
 C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C
C A G T C T A G A G T C C T A G A C T G G T A C C T A G A C T G A T C G C G T A A C T G A G T C

esg/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GTCCGGAGCACC-----
-----NNGCACCTGTNN
 C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T T C A G A T G C C G T A A G T C G A T C A C G T C A T G G A C T A G C T C A G T

ttk/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GTCCGGAGCACC
----GCAGGACC
 C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C
A C G T A C G T A C G T A C G T A T C G G T A C C T G A A C T G A C T G C G T A A G T C G T A C

odd/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GTCCGGAGCACC
AACAGTAGCA--
 C A T G A G C T A T G C G A T C C A T G T A C G G C T A A T C G T A G C C G T A T A G C T G A C
G T C A T G C A A G T C T C G A C T A G C A G T C G T A A C T G A G T C T G C A A C G T A C G T