Information for 2-HGAACAGCTGTT (Motif 2)

G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T
Reverse Opposite:
T C G A G C T A G A T C T C G A T A C G A T G C C G A T C T A G C G A T C A G T A T G C C A G T
p-value:1e-49
log p-value:-1.147e+02
Information Content per bp:1.651
Number of Target Sequences with motif1123.0
Percentage of Target Sequences with motif73.64%
Number of Background Sequences with motif13436.4
Percentage of Background Sequences with motif55.11%
Average Position of motif in Targets232.3 +/- 227.9bp
Average Position of motif in Background105.8 +/- 74.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.91
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box/Drosophila-Promoters/Homer

Match Rank:1
Score:0.95
Offset:2
Orientation:forward strand
Alignment:HGAACAGCTGTT--
--AACAGCTGTTHN
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T A C G T A C G T
A C G T A C G T T C G A G C T A T G A C G C T A C T A G G A T C C G A T A C T G C G A T A G C T G A C T C T A G

sna/MA0086.2/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:HGAACAGCTGTT--
-NTGCACCTGTTNN
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T A C G T A C G T
A C G T C A G T G C A T T C A G G A T C G T C A G A T C G A T C G A C T A T C G G A C T G A C T T C A G G T A C

esg/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:HGAACAGCTGTT-
-NNGCACCTGTNN
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T A C G T
A C G T A T G C G A C T T C A G A T G C C G T A A G T C G A T C A C G T C A T G G A C T A G C T C A G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.67
Offset:6
Orientation:forward strand
Alignment:HGAACAGCTGTT
------GCTGTG
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

sna/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:HGAACAGCTGTT--
-NTGCACCTGTCNN
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T A C G T A C G T
A C G T A C T G C A G T C T A G G T A C C G T A A G T C A G T C C G A T A T C G G A C T A G C T C G A T A G C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:6
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:HGAACAGCTGTT
----CACGTGNT
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T
A C G T A C G T A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T

twi/dmmpmm(Bigfoot)/fly

Match Rank:7
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:HGAACAGCTGTT
----CATGTGTT
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T
A C G T A C G T A C G T A C G T G T A C T C G A A C G T C T A G A C G T A C T G A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:HGAACAGCTGTT
-----NGCTN--
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

twi/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:HGAACAGCTGTT-
----CATGTGTTG
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T A C G T
A C G T A C G T A C G T A C G T G A T C T C G A A C G T C T A G A C G T A C T G A C G T A C G T T A C G

caup/MA0217.1/Jaspar

Match Rank:10
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:HGAACAGCTGTT-
--------TGTTA
 G T C A T A C G G T C A G C T A A G T C C G T A A T C G A T G C A C G T C A T G C G A T A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T G C A T G C T A