Information for 6-RCTATCGATA (Motif 8)

C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A
Reverse Opposite:
G A C T C T G A C G A T T A G C A C T G G T C A A G C T C T G A C A T G G A T C
p-value:1e-47
log p-value:-1.095e+02
Information Content per bp:1.705
Number of Target Sequences with motif921.0
Percentage of Target Sequences with motif49.17%
Number of Background Sequences with motif7981.7
Percentage of Background Sequences with motif32.86%
Average Position of motif in Targets224.2 +/- 222.0bp
Average Position of motif in Background106.0 +/- 74.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BEAF-32/MA0529.2/Jaspar

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:RCTATCGATA--
ACTATCGATAGT
 C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A A C G T A C G T
C T G A G T A C G C A T C G T A G A C T G A T C C T A G C T G A G C A T C G T A C A T G G A C T

DREF/Drosophila-Promoters/Homer

Match Rank:2
Score:0.98
Offset:-1
Orientation:forward strand
Alignment:-RCTATCGATA-
AVYTATCGATAD
 A C G T C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A A C G T
C G T A T C G A G A T C G C A T C G T A A C G T G T A C T C A G G T C A G A C T C G T A C T A G

pnr/MA0536.1/Jaspar

Match Rank:3
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-RCTATCGATA
ANCTATCGATA
 A C G T C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A
T C G A T C G A G T A C G C A T C G T A A C G T A G T C A C T G T C G A C G A T C T G A

Dref/MA1456.1/Jaspar

Match Rank:4
Score:0.97
Offset:0
Orientation:forward strand
Alignment:RCTATCGATA
GCTATCGATA
 C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A
T C A G G A T C A C G T C G T A A C G T A G T C A C T G C G T A G C A T C G T A

Dref/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.97
Offset:2
Orientation:forward strand
Alignment:RCTATCGATA
--TATCGATA
 C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A
A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T C G T A

BEAF-32/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.97
Offset:2
Orientation:forward strand
Alignment:RCTATCGATA
--TATCGATA
 C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A
A C G T A C G T A C G T C G T A A C G T A G T C A C T G C G T A A C G T C G T A

Dref/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:RCTATCGATA-
-CTATCGATAT
 C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A A C G T
A C G T A G T C A C G T C G T A A C G T A G T C A C T G C G T A C A G T G C T A C G A T

Dref/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:RCTATCGATA-
-CTATCGATAT
 C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A A C G T
A C G T A G T C A C G T C G T A A C G T A G T C A C T G C G T A C A G T G C T A C G A T

Dref/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-RCTATCGATA-
TNATATCGATAA
 A C G T C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A A C G T
C G A T A C G T C G A T A C G T C G T A A C G T A G T C A C T G G T C A G C A T C G T A T C G A

srp/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-RCTATCGATA-
ATCAACCGATAG
 A C G T C T A G G T A C G A C T C T G A C A G T A G T C A T C G G C T A G A C T C T G A A C G T
T C G A A C G T A G T C C G A T C T G A A G T C A G T C A T C G C G T A A C G T C G T A T A C G