Information for 3-RTTGTTSTTGTT (Motif 7)

T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T
Reverse Opposite:
G T C A C T G A G T A C G T C A G T C A T A C G C G T A C T G A G T A C T C G A C G T A A G C T
p-value:1e-53
log p-value:-1.238e+02
Information Content per bp:1.690
Number of Target Sequences with motif1154.0
Percentage of Target Sequences with motif61.61%
Number of Background Sequences with motif10624.8
Percentage of Background Sequences with motif43.74%
Average Position of motif in Targets239.3 +/- 223.8bp
Average Position of motif in Background108.9 +/- 79.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.69
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Aef1/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:RTTGTTSTTGTT
--TGTTGTTG--
 T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T
A C G T A C G T C G A T A C T G A C G T C G A T A C T G A C G T A C G T A C T G A C G T A C G T

bab1/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.69
Offset:2
Orientation:forward strand
Alignment:RTTGTTSTTGTT
--TATTATTATT
 T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T
A C G T A C G T C G A T C G T A A C G T C G A T C G T A C G A T A C G T C T A G A C G T A C G T

Aef1/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:RTTGTTSTTGTT
----TTGTTG--
 T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A C G T

hb/dmmpmm(Noyes)/fly

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:RTTGTTSTTGTT--
--TGTTTTTTTNGT
 T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G C A G T A C G T A C G T C A G T A G C T A G C T A C G T A C T G A C T G C A G T

D/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--RTTGTTSTTGTT-
CCATTGTTNTCNGTG
 A C G T A C G T T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T A C G T
A G T C G A T C C G T A A C G T A C G T C T A G A C G T A C G T A T G C C G A T A G T C A C T G C T A G A C G T A C T G

D/MA0445.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---RTTGTTSTTGTT
TCCATTGTTCT----
 A C G T A C G T A C G T T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T
A G C T A G T C A G T C C G T A A C G T A C G T C T A G A C G T A C G T A G T C C G A T A C G T A C G T A C G T A C G T

kni/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RTTGTTSTTGTT--
-TTGNTCCAGTTTT
 T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T A C G T A C G T
A C G T A C G T A G C T C A T G A C G T A G C T A G T C A G T C T G C A C T A G C G A T C G A T G C A T G A C T

ara/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RTTGTTSTTGTT
NNTGTTATTN--
 T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T
A C G T A C G T A C G T A C T G A C G T C G A T G C T A C G A T A C G T G A C T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:RTTGTTSTTGTT
ATTGTT------
 T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Caup/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RTTGTTSTTGTT
NNTGTTATTG--
 T C G A G C A T A G C T C A T G A G C T C G A T A T G C C A G T C A G T C A T G G A C T A C G T
A C G T A C G T A C G T A C T G A C G T G C A T G C T A G C A T G C A T C A T G A C G T A C G T