Information for 3-GGTCACACTA (Motif 4)

A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
Reverse Opposite:
A G C T C T G A C A T G C G A T C T A G C G A T A C T G T C G A A G T C A G T C
p-value:1e-58
log p-value:-1.355e+02
Information Content per bp:1.881
Number of Target Sequences with motif1236.0
Percentage of Target Sequences with motif65.99%
Number of Background Sequences with motif11495.4
Percentage of Background Sequences with motif47.33%
Average Position of motif in Targets235.1 +/- 244.2bp
Average Position of motif in Background105.5 +/- 73.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.91
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer

Match Rank:1
Score:0.96
Offset:-2
Orientation:forward strand
Alignment:--GGTCACACTA
MYGGTCACACTG
 A C G T A C G T A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
T G C A A G T C C T A G A C T G A G C T G T A C T C G A A G T C C G T A A G T C G A C T C T A G

M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer

Match Rank:2
Score:0.95
Offset:-2
Orientation:reverse strand
Alignment:--GGTCACACTA
ACGGTCACACTG
 A C G T A C G T A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
T C G A A G T C T C A G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T C T A G

M1BP/MA1459.1/Jaspar

Match Rank:3
Score:0.95
Offset:-5
Orientation:forward strand
Alignment:-----GGTCACACTA---
GATACGGTCACACTGCTC
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A A C G T A C G T A C G T
T A C G T G C A G C A T T G C A A G T C C T A G C A T G A G C T G T A C G C T A A G T C C G T A A G T C G A C T C T A G G T A C G A C T G T A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGTCACACTA
AGGTCA-----
 A C G T A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T

Hr46/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GGTCACACTA
GGGTCA-----
 A C G T A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
A C T G A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

usp/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGTCACACTA
GGGGTCACG---
 A C G T A C G T A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
T A C G C T A G A C T G A C T G A C G T A G T C C T G A G A T C T A C G A C G T A C G T A C G T

usp/MA0016.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GGTCACACTA
GGGGTCACGG--
 A C G T A C G T A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
A T C G C A T G A C T G A C T G A C G T A G T C C T G A G A T C T A C G A T C G A C G T A C G T

prd/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GGTCACACTA
AATCCGTCACGCT-
 A C G T A C G T A C G T A C G T A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
T G C A G C T A A G C T A G T C T G A C A C T G C G A T A G T C G T C A A G T C C T A G A T G C G A C T A C G T

Hth/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGTCACACTA
NCTGTCANAG--
 A C G T A C G T A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
A T C G G T A C A G C T A C T G A C G T A G T C C G T A G T A C G T C A C A T G A C G T A C G T

caup/MA0217.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGTCACACTA
--TAACA---
 A C T G A C T G A G C T G T A C C G T A A G T C C G T A G T A C A G C T T C G A
A C G T A C G T C G A T C G T A C G T A A G T C C G T A A C G T A C G T A C G T