Information for 1-CAGCACTG (Motif 2)

T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G
Reverse Opposite:
G T A C C G T A A T C G A C G T A C T G A G T C A C G T A C T G
p-value:1e-70
log p-value:-1.620e+02
Information Content per bp:1.791
Number of Target Sequences with motif1072.0
Percentage of Target Sequences with motif57.23%
Number of Background Sequences with motif8968.3
Percentage of Background Sequences with motif36.92%
Average Position of motif in Targets230.8 +/- 250.1bp
Average Position of motif in Background105.3 +/- 73.2bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown2/Drosophila-Promoters/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAGCACTG
CATCMCTA
 T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G
A G T C C G T A C G A T A G T C G T C A A G T C A C G T C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CAGCACTG
CAGCC---
 T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

pros/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CAGCACTG
-AGNCATG
 T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G
A C G T C T G A A C T G G C T A T A G C C T G A C G A T A C T G

tin/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGCACTG--
--GCACTTAA
 T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G A C G T A C G T
A C G T A C G T C T A G A G T C C G T A G T A C A G C T A C G T T C G A T C G A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGCACTG--
----GCTGTG
 T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

POL002.1_INR/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGCACTG-
-NNNANTGA
 T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G A C G T
A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

vnd/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CAGCACTG-----
NNNCCACTTNACAN
 A C G T T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G A C G T A C G T A C G T A C G T A C G T
T G A C G T C A T C A G T A G C G A T C C T G A T A G C A C G T A G C T T C G A G C T A G T A C C G T A G A C T

eyg/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CAGCACTG-------
GAGTANTCACTGAGTNNGN
 A C G T A C G T A C G T A C G T T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G T G C A C T A G A C G T C T G A G A T C A G C T A G T C C G T A G T A C A C G T T A C G T C G A C A T G A C G T T C G A G A T C C A T G A G T C

tin/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAGCACTG--
---CACTTGA
 T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A G T C G T C A A G T C A C G T A C G T T C A G C T G A

tin/dmmpmm(Bergman)/fly

Match Rank:10
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGCACTG--
---CACTTAA
 T G A C C G T A C T A G A G T C G T C A A T G C A C G T C A T G A C G T A C G T
A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T C T A G C G T A