Information for 11-AGCTAGATCTAG (Motif 17)

C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
Reverse Opposite:
A G T C A C G T C T G A C T A G C G T A A C G T A G T C C G A T C G T A A C T G G T A C A G C T
p-value:1e-33
log p-value:-7.702e+01
Information Content per bp:1.872
Number of Target Sequences with motif1614.0
Percentage of Target Sequences with motif86.17%
Number of Background Sequences with motif18145.3
Percentage of Background Sequences with motif74.71%
Average Position of motif in Targets239.4 +/- 236.6bp
Average Position of motif in Background104.4 +/- 74.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.89
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGCTAGATCTAG
--CCATATATGG
 C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
A C G T A C G T G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

onecut/MA0235.1/Jaspar

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGCTAGATCTAG
---TTGATTT--
 C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C G A T A C G T A C G T

kni/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGCTAGATCTAG
AAAANTGGANCAA-
 A C G T A C G T C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
C T G A C G T A C G T A G C T A G A T C A C G T T C A G T C A G T C G A T C G A G A T C C T G A T G C A A C G T

Cf2/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCTAGATCTAG
--GTATATATA-
 C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
A C G T A C G T T C A G A G C T C T G A A G C T T C G A G A C T C T G A A G C T T C G A A C G T

Cf2/MA0015.1/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AGCTAGATCTAG
--GTATATATAC
 C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
A C G T A C G T T C A G A G C T T C G A A G C T G T C A A G C T T C G A G A C T C T G A A G T C

onecut/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGCTAGATCTAG
-NNTTGATTTG-
 C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
A C G T G A C T T A C G G A C T A C G T A C T G C G T A A C G T A C G T C G A T T C A G A C G T

kni/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--AGCTAGATCTAG
AAAACTGGAACAA-
 A C G T A C G T C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
C T G A C G T A C G T A G C T A G A T C A C G T T C A G T C A G T C G A T C G A G A T C C T G A T G C A A C G T

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.50
Offset:2
Orientation:forward strand
Alignment:AGCTAGATCTAG
--TTATTTTTAG
 C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
A C G T A C G T A G C T A C G T C G T A A C G T A C G T C G A T C G A T A C G T C T G A C T A G

ara/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.49
Offset:3
Orientation:forward strand
Alignment:AGCTAGATCTAG
---TTAATT---
 C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A C G T A C G T A C G T A C G T A C G T

kni/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.48
Offset:-1
Orientation:forward strand
Alignment:-AGCTAGATCTAG
AAATGAGATC---
 A C G T C T G A A C T G A G T C A C G T C G T A A C T G C G T A A C G T A G T C A G C T C G T A A C T G
C T G A T C G A C G T A A C G T A C T G T G C A C T A G G T C A G C A T A G T C A C G T A C G T A C G T