Information for 9-CGTCTAGTGG (Motif 13)

A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A G T C A C G T C G T A A C T G C G T A A G T C A C T G
p-value:1e-43
log p-value:-9.926e+01
Information Content per bp:1.964
Number of Target Sequences with motif1435.0
Percentage of Target Sequences with motif76.62%
Number of Background Sequences with motif14955.7
Percentage of Background Sequences with motif61.58%
Average Position of motif in Targets236.8 +/- 223.0bp
Average Position of motif in Background104.8 +/- 74.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.89
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

tin/MA0247.2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGTCTAGTGG
TTTCAAGTGG
 A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G
C G A T A G C T A G C T A G T C C T G A C G T A A C T G A C G T A C T G A T C G

tin/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGTCTAGTGG
NCTCAAGTGG
 A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G
A G T C A G T C C G A T A G T C C G T A C G T A A C T G A C G T C T A G A T C G

tin/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGTCTAGTGG
--TCAAGTG-
 A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G
A C G T A C G T A G C T A G T C C G T A C G T A A C T G A C G T A C T G A C G T

vnd/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CGTCTAGTGG
-CTCAAGTG-
 A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G
A C G T A T G C C A G T A G T C C G T A C G T A C T A G C G A T C T A G A C G T

vnd/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGTCTAGTGG---
NTGTNAAGTGGNNN
 A C G T A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G A C G T A C G T A C G T
C A G T C G A T C A T G C G A T A G C T C T G A C G T A A T C G A G C T C T A G A T C G A G C T A C G T A C T G

tin/dmmpmm(Down)/fly

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGTCTAGTGG
TCTCAAGTGG
 A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G
A C G T A T G C G A C T A G T C C G T A T G C A A C T G A C G T A C T G T A C G

tin/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGTCTAGTGG--
TCTCAAGTGGCN
 A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G A C G T A C G T
A C G T A T G C A G C T A G T C C G T A C G T A A C T G A C G T A C T G T A C G T A G C A C G T

tin/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGTCTAGTGG
--TCAAGTG-
 A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G
A C G T A C G T A C G T A G C T C G T A C G T A A C T G A C G T A C T G A C G T

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGTCTAGTGG
-CTCAAGTG-
 A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G
A C G T A T G C A G C T A G T C C G T A C G T A A C T G A C G T A C T G A C G T

schlank/MA0193.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGTCTAGTGG
---TTGGTAG
 A G T C A C T G A C G T A G T C A C G T C G T A A C T G C G A T A C T G A C T G
A C G T A C G T A C G T G A C T A G C T C T A G A C T G A C G T C T G A A C T G