Information for 12-CGCGTCTCTG (Motif 18)

A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A C T G C G T A A G T C A C T G A G T C A C T G
p-value:1e-45
log p-value:-1.039e+02
Information Content per bp:1.967
Number of Target Sequences with motif2088.0
Percentage of Target Sequences with motif77.02%
Number of Background Sequences with motif15582.6
Percentage of Background Sequences with motif64.42%
Average Position of motif in Targets239.6 +/- 241.0bp
Average Position of motif in Background105.6 +/- 74.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.84
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

h/dmmpmm(Noyes)/fly

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CGCGTCTCTG
TGGCGCGTGNC--
 A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G
A C G T A C T G A C T G G T A C C T A G A G T C A C T G A G C T C A T G A T G C T A G C A C G T A C G T

h/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CGCGTCTCTG
NTGGCGCGTGCCNN
 A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G
G T C A C A G T T A C G A C T G T G A C T C A G G A T C A C T G C A G T C T A G A G T C T A G C A C T G A T G C

Mad/MA0535.1/Jaspar

Match Rank:3
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CGCGTCTCTG
CNGCGNCGGCGCCNG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G
A T G C C A T G T A C G A G T C T A C G A T C G A G T C A T C G C A T G A G T C A C T G G A T C A T G C C G A T T A C G A C G T A C G T

Six4/MA0204.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CGCGTCTCTG
---GTATCA-
 A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G
A C G T A C G T A C G T A C T G A C G T T C G A A C G T A G T C C G T A A C G T

Mad/dmmpmm(Down)/fly

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CGCGTCTCTG-
CGCGACGCCAG
 A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G A C G T
T G A C A C T G T A G C T A C G T C G A G T A C C A T G T A G C G T A C T C G A T A C G

Med/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGCGTCTCTG---
-GCGNCNGGCNNT
 A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G A C G T A C G T A C G T
A C G T A C T G A G T C A C T G A C T G A G T C C A G T A C T G A C T G T A G C G C T A C T A G A C G T

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CGCGTCTCTG
AGCGCGCC----
 A C G T A C G T A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

Trl/dmmpmm(Pollard)/fly

Match Rank:8
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CGCGTCTCTG--
--TTGCTCTCTC
 A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G A C G T A C G T
A C G T A C G T A G C T A G C T C A T G A G T C C A G T G T A C C G A T A T G C A G C T A G T C

h/MA0449.1/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--CGCGTCTCTG
GGCACGTGCC--
 A C G T A C G T A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G
A T C G A C T G A G T C C T G A A G T C C T A G A G C T A C T G T A G C A T G C A C G T A C G T

Trl/MA0205.2/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CGCGTCTCTG----
--TCTCTCTCTTNN
 A G T C A C T G A G T C A C T G A C G T A G T C A C G T A G T C C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G T C A C G T G A T C A C G T T A G C G C A T G T A C C G A T A G C T A G C T A G T C