Information for 4-AACAGCTG (Motif 6)

C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A G T C A C G T A C T G C G A T A C G T
p-value:1e-43
log p-value:-1.013e+02
Information Content per bp:1.953
Number of Target Sequences with motif222.0
Percentage of Target Sequences with motif68.94%
Number of Background Sequences with motif11098.2
Percentage of Background Sequences with motif30.85%
Average Position of motif in Targets470.0 +/- 377.8bp
Average Position of motif in Background107.3 +/- 84.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box/Drosophila-Promoters/Homer

Match Rank:1
Score:0.94
Offset:-2
Orientation:reverse strand
Alignment:--AACAGCTG--
NDAACAGCTGTT
 A C G T A C G T C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G A C G T A C G T
G A T C C T G A T C G A G C T A G T A C G C T A C T A G G A T C C G A T A C T G C G A T A G C T

sna/MA0086.2/Jaspar

Match Rank:2
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AACAGCTG---
GCAACAGGTGCAA
 A C G T A C G T C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
C A T G A G T C C T G A C T G A A T G C C T G A C T A G C A T G C A G T C A T G A G T C C G T A G T C A

sna/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AACAGCTG---
NNAACAGGTGCAN
 A C G T A C G T C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
T C A G G C T A T C A G C T G A A T G C C G T A C T A G C T A G A C G T A C T G A G T C G T C A T A G C

esg/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AACAGCTG---
NNACAGGTGCNN
 A C G T C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G A C G T A C G T A C G T
G A C T C T A G C T G A G A T C C G T A C T A G A C T G A C G T T A C G A G T C C G T A A T C G

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AACAGCTG
ACCACGTG
 C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G
T C G A T A G C G A T C C T G A A T G C T A C G G C A T C T A G

twi/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AACAGCTG
AACACATG
 C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G
G T C A G T C A A G T C C G T A A G T C T G C A A G C T A C T G

twi/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AACAGCTG
CAACACATG
 A C G T C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G
A T G C G T C A T G C A A G T C C G T A A G T C T G C A A G C T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AACAGCTG
CACAGN--
 C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AACAGCTG
--CAGCC-
 C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

sna/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AACAGCTG-
ANCAGGTGG
 C G T A C G T A A G T C C G T A A C T G A G T C A C G T A C T G A C G T
G T C A C T A G A G T C C T G A C T A G A C T G A C G T C A T G T C A G