Information for 1-AGCAACAA (Motif 2)

C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A
Reverse Opposite:
A C G T C G A T A T C G A C G T A C G T A C T G A G T C A G C T
p-value:1e-75
log p-value:-1.728e+02
Information Content per bp:1.777
Number of Target Sequences with motif233.0
Percentage of Target Sequences with motif72.36%
Number of Background Sequences with motif8517.4
Percentage of Background Sequences with motif23.68%
Average Position of motif in Targets397.5 +/- 314.0bp
Average Position of motif in Background109.7 +/- 88.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)2.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Aef1/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.87
Offset:2
Orientation:forward strand
Alignment:AGCAACAA
--CAACAA
 C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A
A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A

Aef1/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.78
Offset:2
Orientation:forward strand
Alignment:AGCAACAA--
--CAACAACA
 C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A A C G T A C G T
A C G T A C G T A G T C C G T A C G T A A G T C C G T A C G T A A G T C C G T A

MF0011.1_HMG_class/Jaspar

Match Rank:3
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:AGCAACAA-
---AACAAT
 C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A A C G T
A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

Caup/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCAACAA-
CAATAACAAA
 A C G T C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A A C G T
G A T C C G T A C G T A C G A T C G T A C G T A A G T C C G T A A C G T A C G T

Mirr/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGCAACAA-
AAAAAACAAA
 A C G T C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A A C G T
C G T A C T G A G T C A C G T A C G T A C G T A A G T C C G T A A C G T A C G T

grh/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGCAACAA-
---AACCAG
 C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A A C G T
A C G T A C G T A C G T C G T A C T G A G A T C G T A C C T G A A C T G

caup/MA0217.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AGCAACAA
--TAACA-
 C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A
A C G T A C G T C G A T C G T A C G T A A G T C C G T A A C G T

D/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AGCAACAA---
CACNGANAACAATGG
 A C G T A C G T A C G T A C G T C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A A C G T A C G T A C G T
T G A C T G C A G A T C A G T C C T A G C G T A T A C G T G C A C G T A A G T C G T C A G T C A C G A T C T A G T C A G

D/MA0445.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCAACAA----
-ANAACAATGGA
 C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A A C G T A C G T A C G T A C G T
A C G T C G T A T C A G T G C A C G T A A G T C G T C A C G T A C G A T C T A G C T A G T C G A

mirr/MA0233.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGCAACAA
--AAACA-
 C T G A C T A G A G T C C G T A G T C A A T G C G C T A G T C A
A C G T A C G T C G T A C G T A C G T A A G T C C G T A A C G T