Information for 4-TTCGCCGCGA (Motif 8)

A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A
Reverse Opposite:
C G A T A G T C A C T G G T A C A C T G A T C G T A G C C T A G G T C A C T G A
p-value:1e-51
log p-value:-1.188e+02
Information Content per bp:1.762
Number of Target Sequences with motif392.0
Percentage of Target Sequences with motif66.67%
Number of Background Sequences with motif12416.9
Percentage of Background Sequences with motif35.74%
Average Position of motif in Targets271.8 +/- 231.2bp
Average Position of motif in Background104.3 +/- 95.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.54
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTCGCCGCGA
TGTCGCCGC--
 A C G T A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A
A G C T A T C G A C G T A G T C A C T G A T G C A T G C C T A G A T G C A C G T A C G T

Deaf1/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCGCCGCGA
TTCGGG----
 A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A
A G C T A C G T A G T C A C T G A C G T A T C G A C G T A C G T A C G T A C G T

Deaf1/MA0185.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTCGCCGCGA
TTCGGG----
 A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A
A G C T A C G T A G T C A C T G A C G T A T C G A C G T A C G T A C G T A C G T

Mad/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TTCGCCGCGA---
--CGCGGCGCCAG
 A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A A C G T A C G T A C G T
A C G T A C G T T G A C C A T G T G A C A T C G T C A G G A T C C T A G G T A C A G T C T C G A C A T G

brk/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTCGCCGCGA
--CGGCGCC-
 A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A
A C G T A C G T A G C T A C T G A C T G G T A C C T A G A G T C A G T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:TTCGCCGCGA
--CGGAGC--
 A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A
A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T

dl/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----TTCGCCGCGA
GGGTTTTCCCNG---
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A
A T C G C T A G C A T G C G A T C G A T A C G T C G A T A G T C A G T C T A G C T G A C A C T G A C G T A C G T A C G T

Mad/dmmpmm(Down)/fly

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TTCGCCGCGA
CTGGCGTCGCG-
 A C G T A C G T A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A
A T G C A G C T C A T G A T C G G T A C C A T G A G C T A T G C A T C G T G A C A C T G A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TTCGCCGCGA-
---GGCGCGCT
 A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A A C G T
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

h/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:TTCGCCGCGA---
--TGGCGCGTGNC
 A G C T A C G T A G T C A T C G A T G C T G A C A C T G A G T C T C A G G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C T G A C T G G T A C C T A G A G T C A C T G A G C T C A T G A T G C T A G C