Information for 3-YGGTCACACT (Motif 3)

G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T
Reverse Opposite:
C T G A C T A G A C G T A C T G A C G T A T C G T C G A T G A C A G T C C T G A
p-value:1e-45
log p-value:-1.049e+02
Information Content per bp:1.729
Number of Target Sequences with motif329.0
Percentage of Target Sequences with motif77.96%
Number of Background Sequences with motif15755.4
Percentage of Background Sequences with motif43.90%
Average Position of motif in Targets266.1 +/- 238.4bp
Average Position of motif in Background105.7 +/- 84.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.62
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown1(NR/Ini-like)/Drosophila-Promoters/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-YGGTCACACT-
MYGGTCACACTG
 A C G T G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T A C G T
T G C A A G T C C T A G A C T G A G C T G T A C T C G A A G T C C G T A A G T C G A C T C T A G

M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer

Match Rank:2
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-YGGTCACACT-
ACGGTCACACTG
 A C G T G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T A C G T
T C G A A G T C T C A G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T C T A G

M1BP/MA1459.1/Jaspar

Match Rank:3
Score:0.94
Offset:-4
Orientation:forward strand
Alignment:----YGGTCACACT----
GATACGGTCACACTGCTC
 A C G T A C G T A C G T A C G T G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T A C G T A C G T A C G T A C G T
T A C G T G C A G C A T T G C A A G T C C T A G C A T G A G C T G T A C G C T A A G T C C G T A A G T C G A C T C T A G G T A C G A C T G T A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:YGGTCACACT
AGGTCA----
 G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

prd/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---YGGTCACACT
AATCCGTCACGCT
 A C G T A C G T A C G T G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T
T G C A G C T A A G C T A G T C T G A C A C T G C G A T A G T C G T C A A G T C C T A G A T G C G A C T

byn/dmmpmm(Bigfoot)/fly

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YGGTCACACT-
---TCGCACNT
 G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T A C G T
A C G T A C G T A C G T C G A T G A T C C A T G A G T C C G T A A G T C G A C T G A C T

Su(H)/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YGGTCACACT
-GTTCCCACG
 G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T
A C G T C A T G A C G T A C G T A G T C G A T C A G T C C G T A G A T C C T A G

caup/MA0217.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:YGGTCACACT
---TAACA--
 G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T
A C G T A C G T A C G T C G A T C G T A C G T A A G T C C G T A A C G T A C G T

Six4/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:YGGTCACACT-
-GGTATCAAAT
 G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T A C G T
A C G T A C T G A C T G A C G T T C G A A C G T A G T C C G T A G C T A G C T A C G A T

byn/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:YGGTCACACT-
---TCGCACTT
 G A C T C T A G A C T G A G C T T A G C T G C A G T A C G T C A A G T C G A C T A C G T
A C G T A C G T A C G T C G A T G A T C C A T G A G T C C T G A G T A C G C A T C G A T