Information for 9-GAGTTGGAAA (Motif 12)

A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A
Reverse Opposite:
A C G T A C G T A C G T A G T C G T A C C T G A C G T A T G A C G C A T G T A C
p-value:1e-18
log p-value:-4.345e+01
Information Content per bp:1.862
Number of Target Sequences with motif170.0
Percentage of Target Sequences with motif40.28%
Number of Background Sequences with motif7501.2
Percentage of Background Sequences with motif20.90%
Average Position of motif in Targets250.9 +/- 230.6bp
Average Position of motif in Background105.3 +/- 85.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Su(H)/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGTTGGAAA
-CGTGGGAAC
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A
A C G T A G T C C A T G A C G T A C T G C T A G A C T G C G T A C G T A G T A C

Su(H)/MA0085.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GAGTTGGAAA------
CTGTGGGAAACGAGAT
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A C T G A C G T A C T G C T A G A C T G C G T A C G T A G T A C A G T C A C T G C G T A C T A G T G C A C A G T

dl/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GAGTTGGAAA----
-----GGAAAATCC
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G C T G A G T C A G C T A C G T A A G C T G T A C T G A C

dl/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GAGTTGGAAA----
----GGGAAAATCC
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G T C A G C T A G T C G A G C T A C G T A C G T A G A C T G T A C T G A C

Unknown6/Drosophila-Promoters/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGTTGGAAA
AATTTTAAAA
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A
C G T A G C T A C G A T A C G T A G C T A G C T C T G A G T C A C G T A G C T A

dl/dmmpmm(Down)/fly

Match Rank:6
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAGTTGGAAA-----
-----GGAAAATCCA
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A G T C A C G T A C G T A A G C T G T A C T A G C T C G A

dl-A/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GAGTTGGAAA-----
----NGGAAAAACCC
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A C T G A C T G C G T A C G T A C G T A C G T A C G T A A G T C A G T C T A G C

dl/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGTTGGAAA----
---GGGGAAAATCC
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C A G C A T G C T A G C T G A T G C A G C T A C G T A A G C T T G A C T G A C

br-Z4/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GAGTTGGAAA--
-----AGAAACA
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A T C G C G T A

Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GAGTTGGAAA------
----GGGAAAAMCCCG
 A C T G C G T A A C T G A C G T A G C T A C T G A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G T C A G C T G A G C T A G C T A G C T A G T A C G T A C T A G C T G A C T C A G