Information for 1-CKCTCTCTCT (Motif 1)

A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T
Reverse Opposite:
G C T A A T C G G T C A A T C G G C T A T C A G G T C A A T C G G T A C T A C G
p-value:1e-72
log p-value:-1.667e+02
Information Content per bp:1.648
Number of Target Sequences with motif301.0
Percentage of Target Sequences with motif71.33%
Number of Background Sequences with motif10303.1
Percentage of Background Sequences with motif28.71%
Average Position of motif in Targets197.8 +/- 173.1bp
Average Position of motif in Background104.9 +/- 93.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Trl/dmmpmm(Down)/fly

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CKCTCTCTCT-
GCTCTCTCTCTC
 A C G T A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T A C G T
C A T G G A T C A C G T G A T C C A G T A G T C A G C T G T A C C A G T A G T C A C G T A G T C

Trl/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.81
Offset:-3
Orientation:forward strand
Alignment:---CKCTCTCTCT
TTNCTCTCTCTCT
 A C G T A C G T A C G T A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T
G A C T C A G T A C G T A G T C C A G T A T G C C A G T A G T C A G C T G T A C G A C T A G T C C G A T

Trl/MA0205.2/Jaspar

Match Rank:3
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:CKCTCTCTCT---
-TCTCTCTCTTNN
 A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T A C G T A C G T A C G T
A C G T A G C T A G T C A C G T G A T C A C G T T A G C G C A T G T A C C G A T A G C T A G C T A G T C

Trl/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-CKCTCTCTCT
TTGCTCTCTC-
 A C G T A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T
A G C T A G C T C A T G A G T C C A G T G T A C C G A T A T G C A G C T A G T C A C G T

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:5
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:CKCTCTCTCT
--CTCTCTCY
 A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T
A C G T A C G T A G T C A G C T A G T C A C G T A G T C A G C T A G T C G A T C

Clamp/MA1700.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CKCTCTCTCT---
TCTCTCGCTCGCTC
 A C G T A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T A C G T A C G T A C G T
A G C T T A G C C A G T A G T C A G C T A G T C A C T G G A T C G C A T A G T C A C T G A G T C C G A T A G T C

Trl/dmmpmm(SeSiMCMC)/fly

Match Rank:7
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CKCTCTCTCT-
TTGCTCTCTCTCTC
 A C G T A C G T A C G T A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T A C G T
G A C T A G C T C A T G A G T C A C G T G A T C G A C T A G T C A C G T T G A C C G A T A G T C A C G T A G T C

z/dmmpmm(Down)/fly

Match Rank:8
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:CKCTCTCTCT
----CACTCA
 A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T
A C G T A C G T A C G T A C G T T A G C C T G A A G T C G C A T T G A C C G T A

z/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CKCTCTCTCT
----CACTCA
 A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T
A C G T A C G T A C G T A C G T T A G C C T G A A G T C A C G T A G T C T C G A

M1BP(Zf)/S2R+-M1BP-ChIP-Seq(GSE49842)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CKCTCTCTCT-
ACGGTCACACTG
 A C G T A T G C C A T G A T G C C A G T A G T C C G A T A T G C C A G T A T G C C G A T A C G T
T C G A A G T C T C A G C A T G A G C T G T A C G T C A A G T C C G T A A G T C G A C T C T A G