Information for 4-CCGAATCTGA (Motif 6)

A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
Reverse Opposite:
G C A T A T G C T G C A T A C G G C T A C G A T C A G T T A G C T C A G T C A G
p-value:1e-101
log p-value:-2.326e+02
Information Content per bp:1.549
Number of Target Sequences with motif520.0
Percentage of Target Sequences with motif77.84%
Number of Background Sequences with motif14150.5
Percentage of Background Sequences with motif37.22%
Average Position of motif in Targets439.4 +/- 348.4bp
Average Position of motif in Background108.5 +/- 82.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)2.42
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Deaf1/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGAATCTGA
CACGAA-----
 A C G T A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
T A G C G T A C A G T C A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Deaf1/MA0185.1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCGAATCTGA
CACGAA-----
 A C G T A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
T A G C G T A C A G T C A C T G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

Deaf1/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGAATCTGA
CCGAAGCGC-
 A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
G T A C A G T C A C T G G T C A G T C A C A G T T A G C C T A G A T G C A C G T

Ap1/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGAATCTGA
GTGACTCAG-
 A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
T C A G A C G T A C T G C G T A A G T C A C G T A G T C C G T A A C T G A C G T

Deaf1/dmmpmm(Down)/fly

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCGAATCTGA
GCCCGAAGCGCT
 A C G T A C G T A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
T C A G A T G C T A G C T G A C T C A G T G C A T G C A C A T G T G A C C A T G A G T C G A C T

bcd/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCGAATCTGA
-CTAATCCG-
 A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
A C G T G A C T G C A T C G T A C T G A C A G T G A T C A G T C A C T G A C G T

bcd-1/dmmpmm(Noyes)/fly

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGAATCTGA
-CTAATCT--
 A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
A C G T A G C T G C A T C G T A C G T A C A G T A G T C A G C T A C G T A C G T

bcd-1/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCGAATCTGA
-CTAATCT--
 A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
A C G T A G C T G C A T C G T A C G T A C A G T A G T C A G C T A C G T A C G T

bcd/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCGAATCTGA
-CTAATCCN-
 A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
A C G T G A T C G C A T C G T A C G T A A C G T A G T C A G T C A T C G A C G T

bcd/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCGAATCTGA
-NTAATCCNN
 A G T C A G T C A T C G G T C A G C T A C G A T A T G C A C G T T A C G C G T A
A C G T G A T C G C A T C G T A C G T A A C G T G A T C A G T C A C T G C A G T