Information for 3-CTGCCGACGTCG (Motif 5)

A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
Reverse Opposite:
G T A C C A T G T G C A G T A C C T A G A G C T A G T C A C T G A T C G A G T C C T G A A T C G
p-value:1e-104
log p-value:-2.402e+02
Information Content per bp:1.713
Number of Target Sequences with motif574.0
Percentage of Target Sequences with motif85.93%
Number of Background Sequences with motif17310.9
Percentage of Background Sequences with motif45.54%
Average Position of motif in Targets428.3 +/- 335.2bp
Average Position of motif in Background107.7 +/- 80.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)2.47
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mad/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CTGCCGACGTCG
CGGCCGACGC--
 A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
A T G C A C G T C T A G T A C G A G T C A C T G C A G T A T G C C T A G G A T C A C G T A C G T

Mad/MA0535.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTGCCGACGTCG-
CNGCGNCGGCGCCNG
 A C G T A C G T A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G A C G T
A T G C C A T G T A C G A G T C T A C G A T C G A G T C A T C G C A T G A G T C A C T G G A T C A T G C C G A T T A C G

Med/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCGACGTCG
ACTGCGCCTG---
 A C G T A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
C T A G G A T C A C G T A C T G A T G C A T C G T A G C A T C G A G C T A T C G A C G T A C G T A C G T

Med/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGCCGACGTCG
GCAGCCGCAGT--
 A C G T A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
T A C G A G T C G T C A A T C G A T C G A T G C A T C G G T A C G T A C C T A G G A C T A C G T A C G T

Adf1/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTGCCGACGTCG
GCTCCCGCCGCN-
 A C G T A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
A C T G A G T C A C G T A T C G A G T C A G C T A C G T A G T C A G C T A C T G A G C T G A C T A C G T

btd/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGCCGACGTCG
ATCCGCCCCC----
 A C G T A C G T A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
G C T A G A C T G T A C A G T C A C T G A G T C A G T C A G T C G T A C A G T C A C G T A C G T A C G T A C G T

btd/MA0443.1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCGACGTCG
TCCGCCCCCT---
 A C G T A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
G A C T G T A C A G T C A C T G A G T C A G T C A G T C G T A C A G T C G A C T A C G T A C G T A C G T

brk/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGCCGACGTCG
CTGGCGCC----
 A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
T A G C A G C T A C T G C T A G A G T C C T A G G A T C A G T C A C G T A C G T A C G T A C G T

brk/dmmpmm(Down)/fly

Match Rank:9
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGCCGACGTCG
CCGGCGCT----
 A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
T A G C G A T C T A C G C T A G A T G C C A T G G T A C A G C T A C G T A C G T A C G T A C G T

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CTGCCGACGTCG
-TGTCGCCGC--
 A T G C A G C T A C T G A T G C A G T C T A C G T C G A A G T C A C T G A C G T G T A C A C T G
A C G T A G C T A T C G A C G T A G T C A C T G A T G C A T G C C T A G A T G C A C G T A C G T