Information for 2-GCGRCGGC (Motif 4)

C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C
Reverse Opposite:
T A C G A G T C A G T C A C T G A G T C G A T C A C T G G A T C
p-value:1e-110
log p-value:-2.554e+02
Information Content per bp:1.719
Number of Target Sequences with motif424.0
Percentage of Target Sequences with motif63.47%
Number of Background Sequences with motif8651.4
Percentage of Background Sequences with motif22.76%
Average Position of motif in Targets391.8 +/- 297.9bp
Average Position of motif in Background108.8 +/- 85.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)2.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mad/dmmpmm(SeSiMCMC)/fly

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GCGRCGGC-
GCGGCGACA
 C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C A C G T
A T C G A G T C A T C G T A C G A G T C A C T G T G C A A T G C T C G A

Mad/dmmpmm(Pollard)/fly

Match Rank:2
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GCGRCGGC--
GCGNCGCCNG
 C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C A C G T A C G T
C T A G A G T C T A C G G A C T A G T C T C A G A T C G G A T C T G A C T A C G

Mad/dmmpmm(Down)/fly

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GCGRCGGC--
CGCGACGCCAG
 A C G T C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C A C G T A C G T
T G A C A C T G T A G C T A C G T C G A G T A C C A T G T A G C G T A C T C G A T A C G

Mad/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GCGRCGGC--
CGCGGCGCCAG
 A C G T C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C A C G T A C G T
T G A C C A T G T G A C A T C G T C A G G A T C C T A G G T A C A G T C T C G A C A T G

Mad/MA0535.1/Jaspar

Match Rank:5
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----GCGRCGGC--
CNGCGNCGGCGCCNG
 A C G T A C G T A C G T A C G T A C G T C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C A C G T A C G T
A T G C C A T G T A C G A G T C T A C G A T C G A G T C A T C G C A T G A G T C A C T G G A T C A T G C C G A T T A C G

brk/dmmpmm(Down)/fly

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCGRCGGC
AGCGCCGG-
 A C G T C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C
T C G A C A T G G T A C T A C G G A T C A T G C C T A G A T C G A C G T

brk/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCGRCGGC
GGCGCCAG-
 A C G T C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C
T C A G C A T G A G T C A C T G A G T C A G T C C T G A A T C G A C G T

brk/dmmpmm(SeSiMCMC)/fly

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GCGRCGGC
GGCGCCAG-
 A C G T C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C
C T A G C T A G A G T C A C T G A G T C A G T C C T A G A T C G A C G T

brk/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCGRCGGC
GGCGCCA--
 A C G T C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C
C T A G C T A G A G T C A C T G A G T C A G T C C T A G A C G T A C G T

brk/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCGRCGGC
GGCGCCAG-
 A C G T C T A G T G A C C T A G T C A G T A G C C T A G T C A G A T G C
T C A G C A T G A G T C A C T G A G T C A G T C C T G A A T C G A C G T