Information for 1-CTCTCTCTCT (Motif 1)

G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T
Reverse Opposite:
T G C A T C A G T C G A C T A G T C G A T C A G T G C A A C T G T G C A C A T G
p-value:1e-128
log p-value:-2.966e+02
Information Content per bp:1.669
Number of Target Sequences with motif499.0
Percentage of Target Sequences with motif74.70%
Number of Background Sequences with motif11136.9
Percentage of Background Sequences with motif29.30%
Average Position of motif in Targets323.7 +/- 265.1bp
Average Position of motif in Background106.8 +/- 89.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)2.37
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Trl/dmmpmm(Down)/fly

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCT-
GCTCTCTCTCTC
 A C G T G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T A C G T
C A T G G A T C A C G T G A T C C A G T A G T C A G C T G T A C C A G T A G T C A C G T A G T C

Trl/MA0205.2/Jaspar

Match Rank:2
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCT-
TCTCTCTCTTNN
 A C G T G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T A C G T
A G C T A G T C A C G T G A T C A C G T T A G C G C A T G T A C C G A T A G C T A G C T A G T C

Trl/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---CTCTCTCTCT
TTNCTCTCTCTCT
 A C G T A C G T A C G T G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T
G A C T C A G T A C G T A G T C C A G T A T G C C A G T A G T C A G C T G T A C G A C T A G T C C G A T

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:CTCTCTCTCT
CTCTCTCY--
 G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T
A G T C A G C T A G T C A C G T A G T C A G C T A G T C G A T C A C G T A C G T

Trl/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---CTCTCTCTCT-
TTGCTCTCTCTCTC
 A C G T A C G T A C G T G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T A C G T
G A C T A G C T C A T G A G T C A C G T G A T C G A C T A G T C A C G T T G A C C G A T A G T C A C G T A G T C

Trl/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCT
TTGCTCTCTC-
 A C G T G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T
A G C T A G C T C A T G A G T C C A G T G T A C C G A T A T G C A G C T A G T C A C G T

Clamp/MA1700.1/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCT---
TCTCTCGCTCGCTC
 A C G T G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T A C G T A C G T A C G T
A G C T T A G C C A G T A G T C A G C T A G T C A C T G G A T C G C A T A G T C A C T G A G T C C G A T A G T C

z/dmmpmm(Down)/fly

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCTCTCTCT
--CACTCA--
 G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T
A C G T A C G T T A G C C T G A A G T C G C A T T G A C C G T A A C G T A C G T

Blimp-1/dmmpmm(Noyes)/fly

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTCTCT----
ACTTTCACTTTCNTT
 A C G T G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C T G A A G T C A C G T A G C T A C G T A G T C T C G A A G T C A C G T A C G T C G A T A G T C C A G T A C G T A C G T

z/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCTCTCTCT
CACTCA----
 G T A C A C G T T G A C A C G T A G T C A G C T G A T C A G C T A G T C A C G T
T A G C C T G A A G T C A C G T A G T C T C G A A C G T A C G T A C G T A C G T